PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00606.1.p
Common NameMIMGU_mgv1a020800mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 330aa    MW: 36139.2 Da    PI: 10.1468
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00606.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.63.9e-19184217134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C+ C+ttkTplWR+gp g+k+LCnaCG+++rk +
  Migut.J00606.1.p 184 CADCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 217
                       *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011412.505178214IPR000679Zinc finger, GATA-type
SMARTSM004014.8E-19178229IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.8E-12181218No hitNo description
Gene3DG3DSA:3.30.50.101.2E-15182217IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.32E-13183215No hitNo description
PROSITE patternPS003440184209IPR000679Zinc finger, GATA-type
PfamPF003208.0E-17184217IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007623Biological Processcircadian rhythm
GO:0009416Biological Processresponse to light stimulus
GO:0009735Biological Processresponse to cytokinin
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0009910Biological Processnegative regulation of flower development
GO:0010187Biological Processnegative regulation of seed germination
GO:0010380Biological Processregulation of chlorophyll biosynthetic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MNLNSLPILE QMNNHKDHDQ QHNQQQLPFA LIATHNQLVS SSSSSSSSQL FFTTPPHHQL  60
YNQPHFQDHM DENYAYHRGG SSYEIKNSNS NNNNNNNNNG LKITLWKKEP DEGAAADINP  120
VKWMSSKIRL MKRMNKNIPA KSKIDSDQNP SSNSSLLESS DHLSSGNSSS YNNNNNSNYP  180
IRVCADCNTT KTPLWRSGPK GPKSLCNACG IRQRKARRAM AAAAAAASGA VVAANQPPPV  240
LKIKVQHKEK MGKNNGHSSL LKKRFKTADN NTNAAGSSAD STNNGKKKLG FEEFLINLSN  300
NLSIHRVFPD DEKDAAILLM ALSSGLVHG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00606.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848547.11e-147PREDICTED: putative GATA transcription factor 22
TrEMBLA0A022QLD51e-164A0A022QLD5_ERYGU; Uncharacterized protein
STRINGMigut.J00606.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30972249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-28cytokinin-responsive gata factor 1