PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00594.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family FAR1
Protein Properties Length: 767aa    MW: 87983.6 Da    PI: 7.3609
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00594.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.88.7e-2448133190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYneYA+++GF +++++s++sk++g++++ +  Cs+ g++++++++     ++++  +t+Cka++++kk  dgkw++ ++++eHnHe+ 
  Migut.J00594.1.p  48 SFYNEYARKIGFGITIKSSRRSKKSGKFIDIKIACSRFGSNRHSNTA----ISPKSCPKTDCKASMHIKKIPDGKWYICNFVQEHNHEIR 133
                       5*****************************************98777....99999*******************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.6E-2148133IPR004330FAR1 DNA binding domain
PfamPF105511.7E-23217308IPR018289MULE transposase domain
PROSITE profilePS509669.075495533IPR007527Zinc finger, SWIM-type
SMARTSM005758.7E-8508535IPR006564Zinc finger, PMZ-type
PfamPF044346.7E-5509531IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 767 aa     Download sequence    Send to blast
MEIDLEFCSG QEPGINPGVG INNDIGTVMN CGMPRNGMEF ESKETAYSFY NEYARKIGFG  60
ITIKSSRRSK KSGKFIDIKI ACSRFGSNRH SNTAISPKSC PKTDCKASMH IKKIPDGKWY  120
ICNFVQEHNH EIRPDDIYNN SVRGKKNRND NALCRKKGLQ LALDERDVQL LLDYFMYMQA  180
EAPGFYYVLD FDKEACMRNV FWVDPKGRHD YVHFSDVVFF DTHYIKSKYG IPFVPIIGVN  240
HHFQFVLLGC ALIGDESQST FVWLMRTWLR AVSGNSPKVV ITDNDNSLIE AVSEVFPNAF  300
HCFSPGHVLN EVGPTLSHKL SGLEVFVLEL KECMFGSWSN EEFEHRWKNM VKEFDLADDK  360
WMQSMYKDRR KWVPTYMRHV FLGGFCTVER SQSVASFFDK YLQKETKIEE FIDRYTLFLH  420
ERCEEEARAD IETHHAPPIS ISRSPFEKQM SRLYTHATFK KFQNEVWGMA ACRVRKEAED  480
EKTITFRVDD LERKQSFALS WDKGKCDMCC LCRLFEYNGF LCRHALSVLE LLGISTIPSD  540
YILKRWTRKA KIRDTTNPAL INTNFRVQRL NYLCKVAMKL SEEGSSSGEA YQVAFNAIEE  600
ALKHCVGVNN SEKSVLETDR TAARGPYGKI KKVSKKQQVR SEDETLSFGI EESSQNVEQL  660
NERSRSFHES YISQQDTQGM GNLNPNTLSS LHDCYYSDQP ITQGVLGNLN AVSAHVSHHH  720
TTEHNLQGML QGQFSFGASS VEGCFQLTDR LHNETSVNRT SKHLHD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00594.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848946.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 2
TrEMBLA0A022QJ500.0A0A022QJ50_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.J00594.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49621103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32250.30.0FAR1-related sequence 2