PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00525.1.p
Common NameLOC105961245, MIMGU_mgv1a003574mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 577aa    MW: 64649.8 Da    PI: 6.9981
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00525.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.4e-10449496448
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                       WTt E  +l+d+v ++G g+W++I + +     +Rt  ++k++w+++l
  Migut.J00525.1.p 449 WTTAEVRKLIDGVSEHGVGRWSRIKKLLFsssAHRTSVDLKDKWRNLL 496
                       **********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.337441500IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.5E-13442501IPR009057Homeodomain-like
SMARTSM007172.8E-10445498IPR001005SANT/Myb domain
CDDcd116605.92E-19449497No hitNo description
PfamPF002494.1E-8449496IPR001005SANT/Myb domain
SuperFamilySSF466892.08E-15449508IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MENGSPTIGF EDGTIDVDCL LVEPQNGHVS MDSAMCFNEK IPDNSIDMED VSCSFGLTNT  60
GIAQGGDEIL DRDVLDSICS EVEDGYFRLQ NDFCSMGEEY LLGFEFPESI TNLDYISREE  120
ALQTSVSYGP PLGSCLNIDS TPWKSNLFSI MEPTICHNMP ETLVEEEKKP LNEDIIDKFH  180
DISSCSFGDV VLSDEKYTSP SPSNDEFGQV GPTKFNKLDN TLLKMSAETL PTQKRSRKPT  240
QRYIDELADP ISRHSKKRRE FSSSSTVKDK TLVVKDHKKC QMGSRAMILP SEEESSIIAI  300
QVPFGSLAHK ECPNLPSCDA VHGSDRGNPT IKPKENQKKR DDCMTALDLK KRDESAATSA  360
CPKKREDDVI AAHLRKGDRQ MTAVNLKKRD ESAATSASPK KREGDAIAAH LRKGERRTIP  420
SQKKRDEYDP SFDCPEEEVS GRRKHHILWT TAEVRKLIDG VSEHGVGRWS RIKKLLFSSS  480
AHRTSVDLKD KWRNLLKASG SQGQGSLQVG ERRRNLAWRP LPKSILRRVR ELANVYPYPK  540
GRKHKIGARI NRDSPDISTD ITLSDYRRIL RSINGD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00525.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840937.10.0PREDICTED: uncharacterized protein LOC105961245
TrEMBLA0A022R4E00.0A0A022R4E0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91551723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.14e-21TRF-like 6