PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J00338.2.p | ||||||||
Common Name | MIMGU_mgv1a025403mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Dof | ||||||||
Protein Properties | Length: 378aa MW: 39890.2 Da PI: 9.4907 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.7 | 2.6e-38 | 86 | 145 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+ lkcprCds+ntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ Migut.J00338.2.p 86 ETCLKCPRCDSANTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 145 6679*****************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-33 | 69 | 138 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.4E-31 | 88 | 143 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.562 | 89 | 143 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 91 | 127 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence Send to blast |
MVFSSIPAYL DPSNWHQQQS HQIIGRSSSS GNPLLPPPPQ PPGPPQQGPP PPPQHPQQPH 60 GGGGAGSVRP GSMSERARMA NIPMPETCLK CPRCDSANTK FCYFNNYSLT QPRHFCKTCR 120 RYWTRGGALR NVPVGGGCRR NKRSKSSSSS KSPASSERQT STNPTSTSTI STNNGGAAAN 180 NNMLPPLRFM SPLGQLTTDN FAGDMGLNYS GMTTAAPLVG TTHEMNFHGI TSNLMGPTGG 240 LAASLMSSGD HGGGSIEPWR LQQVQQFPFF GGGLDPTSPG MYQFYGGESG FMGGGLQGGG 300 SHNQVRGNNK GSSSSSVKME ENPAELNLSR QLLGGFMAAG NHEQWINNNT SNISTPAVNW 360 TELSSNNFSS SSTSNPV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 288 | 300 | SGFMGGGLQGGGS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J00338.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012832005.1 | 0.0 | PREDICTED: dof zinc finger protein DOF2.4-like isoform X2 | ||||
TrEMBL | A0A022RS10 | 1e-169 | A0A022RS10_ERYGU; Uncharacterized protein | ||||
STRING | Migut.J00338.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37590.1 | 7e-44 | DNA binding with one finger 2.4 |
Link Out ? help Back to Top | |
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Phytozome | Migut.J00338.2.p |