PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J00338.2.p

Common Name

MIMGU_mgv1a025403mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 378aa MW: 39890.2 Da PI: 9.4907

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J00338.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.7	2.6e-38	86	145	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+ lkcprCds+ntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ Migut.J00338.2.p 86 ETCLKCPRCDSANTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 145 6679*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-33	69	138	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.4E-31	88	143	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.562	89	143	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	91	127	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence Send to blast
MVFSSIPAYL DPSNWHQQQS HQIIGRSSSS GNPLLPPPPQ PPGPPQQGPP PPPQHPQQPH 60 GGGGAGSVRP GSMSERARMA NIPMPETCLK CPRCDSANTK FCYFNNYSLT QPRHFCKTCR 120 RYWTRGGALR NVPVGGGCRR NKRSKSSSSS KSPASSERQT STNPTSTSTI STNNGGAAAN 180 NNMLPPLRFM SPLGQLTTDN FAGDMGLNYS GMTTAAPLVG TTHEMNFHGI TSNLMGPTGG 240 LAASLMSSGD HGGGSIEPWR LQQVQQFPFF GGGLDPTSPG MYQFYGGESG FMGGGLQGGG 300 SHNQVRGNNK GSSSSSVKME ENPAELNLSR QLLGGFMAAG NHEQWINNNT SNISTPAVNW 360 TELSSNNFSS SSTSNPV*

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence Send to blast

MVFSSIPAYL DPSNWHQQQS HQIIGRSSSS GNPLLPPPPQ PPGPPQQGPP PPPQHPQQPH  60
GGGGAGSVRP GSMSERARMA NIPMPETCLK CPRCDSANTK FCYFNNYSLT QPRHFCKTCR  120
RYWTRGGALR NVPVGGGCRR NKRSKSSSSS KSPASSERQT STNPTSTSTI STNNGGAAAN  180
NNMLPPLRFM SPLGQLTTDN FAGDMGLNYS GMTTAAPLVG TTHEMNFHGI TSNLMGPTGG  240
LAASLMSSGD HGGGSIEPWR LQQVQQFPFF GGGLDPTSPG MYQFYGGESG FMGGGLQGGG  300
SHNQVRGNNK GSSSSSVKME ENPAELNLSR QLLGGFMAAG NHEQWINNNT SNISTPAVNW  360
TELSSNNFSS SSTSNPV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	288	300	SGFMGGGLQGGGS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J00338.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012832005.1	0.0	PREDICTED: dof zinc finger protein DOF2.4-like isoform X2
TrEMBL	A0A022RS10	1e-169	A0A022RS10_ERYGU; Uncharacterized protein
STRING	Migut.J00338.1.p	0.0	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	7e-44	DNA binding with one finger 2.4

Link Out ? help Back to Top
Phytozome	Migut.J00338.2.p