PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.I01072.1.p | ||||||||
Common Name | LOC105976015, MIMGU_mgv1a020950mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB | ||||||||
Protein Properties | Length: 208aa MW: 23736.4 Da PI: 8.6401 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eE +l++av+ +G + W tI ++ g++R++k+c++rw +yl Migut.I01072.1.p 20 RGAWTPEENRKLAEAVTIHGAKEWPTIVSKAGLNRCAKSCRLRWMNYL 67 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.8e-17 | 73 | 117 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E++l+++++k+lG++ W++Ia++++ gRt++++k++w+ + Migut.I01072.1.p 73 RGNMSDQEEDLIIRLHKLLGNR-WSLIAARLP-GRTDNEIKNYWNCH 117 899*******************.*********.***********977 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 15.651 | 15 | 67 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 4.59E-28 | 18 | 114 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 5.0E-13 | 19 | 69 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 7.3E-15 | 20 | 67 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.3E-22 | 21 | 74 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.01E-8 | 22 | 67 | No hit | No description |
PROSITE profile | PS51294 | 25.307 | 68 | 122 | IPR017930 | Myb domain |
SMART | SM00717 | 1.2E-16 | 72 | 120 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 5.7E-15 | 73 | 115 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.9E-24 | 75 | 121 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 7.73E-11 | 75 | 118 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MARRKGDDGS IRKKQQELNR GAWTPEENRK LAEAVTIHGA KEWPTIVSKA GLNRCAKSCR 60 LRWMNYLRPN IKRGNMSDQE EDLIIRLHKL LGNRWSLIAA RLPGRTDNEI KNYWNCHLSK 120 KKSEEEALVA GISMGSKSGQ RFIGEEENNN NNSNNNNNNN RASCSSGVEV SSEEEQKTRF 180 DVNDFFDFSN ENPSTLEWVT KFIEFGE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1a5j_A | 2e-27 | 17 | 121 | 4 | 107 | B-MYB |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Regulates the production of a signal that induces hair (trichome) precursor cells on leaf primordia to differentiate. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.I01072.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012856748.1 | 1e-151 | PREDICTED: transcription factor MYB114-like | ||||
Swissprot | Q947R4 | 4e-50 | GL1_ARALY; Trichome differentiation protein GL1 | ||||
TrEMBL | A0A022Q0M5 | 1e-150 | A0A022Q0M5_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12 | 24 | 2154 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G40330.1 | 5e-52 | myb domain protein 23 |
Link Out ? help Back to Top | |
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Phytozome | Migut.I01072.1.p |
Entrez Gene | 105976015 |