PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.I01007.1.p | ||||||||
Common Name | LOC105975555, MIMGU_mgv1a020718mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Dof | ||||||||
Protein Properties | Length: 244aa MW: 25466.4 Da PI: 6.0708 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.8 | 6.6e-40 | 23 | 83 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCds+ntkfCyynny+lsqPr+fCk+C+ryWtkGGalrn+PvGgg+rkn k+s Migut.I01007.1.p 23 EQEHLKCPRCDSANTKFCYYNNYNLSQPRHFCKSCKRYWTKGGALRNIPVGGGSRKNAKRS 83 57899****************************************************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 1.3E-33 | 25 | 81 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.161 | 27 | 81 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 8.0E-23 | 27 | 75 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 29 | 65 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MQDPSLYSQI NAQAHQPQPQ FPEQEHLKCP RCDSANTKFC YYNNYNLSQP RHFCKSCKRY 60 WTKGGALRNI PVGGGSRKNA KRSSSSSATP SSSAAANKRP ATSAPETSSN DQNKDHGESN 120 TEAVLPPKGE NFVGQFGNFL EASGSFSSLL GSSGGQFGNF LEGLGPNGSG LQMNDHFGDQ 180 GSGQNMDPHV LDSGGGDHNA DDGFLNIHGG DGGGDGGGGE TGWSGGSNGW PDLAIYTPGS 240 TFL* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00199 | DAP | Transfer from AT1G51700 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.I01007.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012856207.1 | 1e-178 | PREDICTED: dof zinc finger protein DOF3.1 | ||||
TrEMBL | A0A022Q0V1 | 1e-177 | A0A022Q0V1_ERYGU; Uncharacterized protein | ||||
STRING | Migut.I01007.1.p | 1e-178 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21270.1 | 2e-31 | DOF zinc finger protein 2 |
Link Out ? help Back to Top | |
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Phytozome | Migut.I01007.1.p |
Entrez Gene | 105975555 |