PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00979.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 427aa    MW: 46977 Da    PI: 9.3544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00979.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.1e-07319359954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r+RR+ri +++  L+ l+P        K++ a++L +A  Y+k L
  Migut.I00979.1.p 319 ARQRRERISERIRVLQGLVPGG-----SKMDTASMLDEAASYLKFL 359
                       69******************95.....5****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.557310359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-13315372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-12316365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-12318375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-4319359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.49E-4332364No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MDGLDWSRYY HHQQIEETNL ISNNIFYREN LNIPIQKSTD SFPNLFSPQW NNINNNNSRL  60
STGGTTTTNW AGGPAAINAG VGGGALNNSY NINPTNNNIG LILDPAGNLP IIQRNNGRVF  120
EPVISTNTGS IESLDCLLSV SNSQTEATSV EDDGVSLLFS DSNRSFWNFT PTVKSVPPSS  180
EISPPKINEP NNPPLNKKRR AEESQRRSTF SDQASLNRRN KAPPAKKGRV ALLHDDNIYS  240
INYKRATSSS SNINFQQASS SASASSSAEE PDPEAIAQMK EIIYRAAAFR PVDFGAEAAA  300
EKPRRKNVRI SNDPQTVAAR QRRERISERI RVLQGLVPGG SKMDTASMLD EAASYLKFLR  360
SQVKALEELG QKINDQTAVS NYYANLAFSP FLNSYSFTMQ NHHHQPPPPP PQFTIHSQNP  420
VNGSKT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1300306EKPRRKN
2301306KPRRKN
3319324RQRRER
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00979.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856882.10.0PREDICTED: transcription factor bHLH87
RefseqXP_012856883.10.0PREDICTED: transcription factor bHLH87
TrEMBLA0A022Q0432e-91A0A022Q043_ERYGU; Uncharacterized protein
STRINGMigut.I00979.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43502242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.14e-48bHLH family protein