PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.I00932.2.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 317aa MW: 35162.8 Da PI: 9.4327

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.I00932.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	247	285	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq Migut.I00932.2.p 247 RKEKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 285 6678889999999999998.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.846	235	284	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.24E-6	245	289	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.9E-7	245	290	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	6.8E-10	245	294	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence Send to blast
MMAGNPNWWS MVTNNGMHPQ SQQLSNSHSF IYGGSNSPPP PLSPHPPSPA PHHHHPDHDF 60 PVRSWSQMLL GGLGGEEEER FGASLFQQQK KLENWEEQLV FNNFTNNINT RVINNNNPIV 120 DVKQEVVAQA TYGRHVLLQD DDNHQFQANN NYSNSTNWPI NINISNNNNN SHHQVMPVSS 180 PTSCITTLSN NILNFSGGKQ AAAATQQRKN QQHNQDHSSE SNSTNSGGVS KKARVQQSSA 240 QPALKVRKEK LGDRITALHQ LVSPFGKTDT ASVLSEAIGY IRFLQGQIEV IFAPFHHSKK 300 RFVPVLPQSS STFRTT*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.I00932.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012856867.1	0.0	PREDICTED: transcription factor bHLH68-like isoform X1
Refseq	XP_012856868.1	0.0	PREDICTED: transcription factor bHLH68-like isoform X2
TrEMBL	A0A2Z7DE92	1e-100	A0A2Z7DE92_9LAMI; Basic helix-loop-helix DNA-binding superfamily protein isoform 1
STRING	Migut.I00932.1.p	0.0	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	2e-28	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.I00932.2.p