PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00906.1.p
Common NameMIMGU_mgv1a001344mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 844aa    MW: 92264.5 Da    PI: 6.5917
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00906.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.89.1e-192683457
                      -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                        ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Migut.I00906.1.p 26 YVRYTPEQVEALERLYHDCPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                      6789****************************************************97 PP
2START173.21.6e-541703782205
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  ++   v+e+l+d++ W ++++++++l+v+ ++  g+++
  Migut.I00906.1.p 170 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCSGVAARACGLVGLEPS-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTIE 261
                       7899******************************************************.8888888888****************9999**** PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++l+a+++l+p Rdf+ +Ry+  + +g+ v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h + ++++++++l
  Migut.I00906.1.p 262 LLYMQLYAPTTLAPgRDFWLLRYTSVMDDGSMVVCERSLSNTQNGPSmpaVPNFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNFEAWSVPEVL 354
                       **********************************************99999****************************************** PP

                       HHHHHHHHHHHHHHHHHHTXXXXX CS
             START 182 rslvksglaegaktwvatlqrqce 205
                       r+l++s+++ ++k+++a+l+++++
  Migut.I00906.1.p 355 RPLYESSTMLAQKITMAALRQLRQ 378
                       ********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.5322084IPR001356Homeobox domain
SMARTSM003893.3E-162288IPR001356Homeobox domain
SuperFamilySSF466899.84E-172487IPR009057Homeodomain-like
CDDcd000868.06E-172585No hitNo description
PfamPF000462.2E-162683IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.1E-182783IPR009057Homeodomain-like
CDDcd146862.99E-677116No hitNo description
PROSITE profilePS5084824.971160361IPR002913START domain
CDDcd088755.81E-74164380No hitNo description
SMARTSM002346.6E-41169379IPR002913START domain
Gene3DG3DSA:3.30.530.207.9E-22169375IPR023393START-like domain
SuperFamilySSF559614.53E-38169381No hitNo description
PfamPF018525.2E-52170378IPR002913START domain
SuperFamilySSF559614.4E-5408597No hitNo description
PfamPF086708.9E-51699842IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009965Biological Processleaf morphogenesis
GO:0010014Biological Processmeristem initiation
GO:0010075Biological Processregulation of meristem growth
GO:0010087Biological Processphloem or xylem histogenesis
GO:0048263Biological Processdetermination of dorsal identity
GO:0080060Biological Processintegument development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    Send to blast
MAMSCKDSNK AAAAAAAAAA AMDGKYVRYT PEQVEALERL YHDCPKPSSM RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QGVNRKLTAM NRLLMEENDR LQKQVSQLVY  120
ENGYFRQNNP SNALPTKDTS CESVVTSGQK HHLTPQHPPR DASPAGLLSI AEETLAEFLS  180
KATGTAVEWV QMPGMKPGPD SIGIVAISHG CSGVAARACG LVGLEPSRVA EILKDRPSWF  240
RDCRAVDVLN VLPTANGGTI ELLYMQLYAP TTLAPGRDFW LLRYTSVMDD GSMVVCERSL  300
SNTQNGPSMP AVPNFVRAEM LPSGYLIRPC DGGGSIIHIV DHLNFEAWSV PEVLRPLYES  360
STMLAQKITM AALRQLRQIA QDNSQSSVTN WGRRPAALRA LSHRLSRGFN EALNGFNDEG  420
WSLLGNDGMD DITILVNSNP DKLITLNTPF TNGYNSISNS VLCAKASMLL QNVPPAILLR  480
FLREHRSEWA DTSIDAYSAA AIKIGPRVGN FGGQVILPLA QTFEHEELLE VIKLEGVVQS  540
PEDAMMPRDV LLLQLCSGMD ENTVGTCAEL IFAPIDASFT DDVPLLPSGF RIIPLDSCKE  600
TGSPNRTLDL ASALEAGTAG AKSLNGVSMT GGATRSVMTI AFQFGFESHM QENVASIARQ  660
YVRSIISSVQ RVALALSPSH VGPHGSGLRS SLGNPEAHTL ARWICQSYRN YMGVELLKCS  720
GGGGHESILK AMWHHSDAIL CCSVKALPVF TFANQAGVDM LETTLVALQD IPLEKIFDDN  780
GRKNLCSEFP QIMNQGFASL QGGICLSSMG RPISYERAVA WKVLNEEDDA HCICFMFVNW  840
SFV*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of meristem development to promote lateral organ formation. May regulates procambial and vascular tissue formation or maintenance, and vascular development in inflorescence stems. {ECO:0000269|PubMed:15598805, ECO:0000269|PubMed:15705957, ECO:0000269|PubMed:16617092}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00200DAPTransfer from AT1G52150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00906.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By auxin. Repressed by miR165 and miR166. {ECO:0000269|PubMed:15773855, ECO:0000269|PubMed:16033795, ECO:0000269|PubMed:16617092, ECO:0000269|PubMed:17237362}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856468.10.0PREDICTED: homeobox-leucine zipper protein ATHB-15-like
SwissprotQ9ZU110.0ATB15_ARATH; Homeobox-leucine zipper protein ATHB-15
TrEMBLA0A022Q4S60.0A0A022Q4S6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45724140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]