PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00726.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 270aa    MW: 29188.6 Da    PI: 10.5428
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00726.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-20119168255
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  Migut.I00726.1.p 119 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 168
                       69*******.**********32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.93E-15118175No hitNo description
PROSITE profilePS5103222.563119176IPR001471AP2/ERF domain
SMARTSM003806.8E-33119182IPR001471AP2/ERF domain
PfamPF008472.5E-14119168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-29119176IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-22119177IPR016177DNA-binding domain
PRINTSPR003671.1E-10120131IPR001471AP2/ERF domain
PRINTSPR003671.1E-10142158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MLANLFPKLE LLEQADDHQM LNQWPHNNHF FLFQSDFLAQ SRRVLPSTAF SGDGDESAAA  60
AAHDDHHHHH QQNPPVVLEG IAAVVGEHVL FGGGAAVKNK HVVGGGGGGG DDVVGVKKSY  120
RGVRKRPWGR WSAEIRDRIG RCRHWLGTFD TAEEAARAYD AAARRLRGSK ARTNFHIPSV  180
LPAVVPSSSS SSNNNNNNNN NNSSKKKRGN NGKGKMVNVS KKCSVVTSAA HLFGPIPDSE  240
SERPPPPPGV SLELRLNLGR SFTDRIAKP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-16109175471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00726.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856152.10.0PREDICTED: ethylene-responsive transcription factor ERF084
TrEMBLA0A022PZD61e-119A0A022PZD6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.18e-26ERF family protein