PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00074.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 231aa    MW: 25210.4 Da    PI: 9.2016
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00074.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-1370114347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE++l++ + ++ G g+W+ I+r   k+Rt+ q+ s+ qky
  Migut.I00074.1.p  70 PWTEEEHKLFLIGLEKIGRGDWRGISRNYVKTRTPTQVASHAQKY 114
                       8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129313.10766119IPR017884SANT domain
SuperFamilySSF466897.33E-1766120IPR009057Homeodomain-like
SMARTSM007173.1E-867117IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.2E-1069114IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-1669117IPR006447Myb domain, plants
CDDcd001675.64E-970115No hitNo description
PfamPF002491.3E-1070114IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MSLCSETPSA AAGGGEIMLF GVRVRVDPMR KSVSMNNLSE YEPVVNCSNP NDVNNTTEAP  60
KVAAEDGGVP WTEEEHKLFL IGLEKIGRGD WRGISRNYVK TRTPTQVASH AQKYFLRRNN  120
LNRRRRRSSL FDITTDSVTA MATEESKNHQ DNTPVQMVPR PPPTVAMPLP VTSNVNGFSL  180
GPVLFSNQHV KNEASSLSLR LSLSSGQDQP SRMGSPFHML NSGDSVLSVA *
Functional Description ? help Back to Top
Source Description
UniProtBinds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00074.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831100.11e-139PREDICTED: transcription factor MYB1R1
SwissprotQ2V9B03e-52MY1R1_SOLTU; Transcription factor MYB1R1
TrEMBLA0A022RRY81e-134A0A022RRY8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25742351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.26e-47MYB_related family protein
Publications ? help Back to Top
  1. Shin D, et al.
    Expression of StMYB1R-1, a novel potato single MYB-like domain transcription factor, increases drought tolerance.
    Plant Physiol., 2011. 155(1): p. 421-32
    [PMID:21030505]