PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H02266.1.p
Common NameMIMGU_mgv1a024641mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 533aa    MW: 57367.3 Da    PI: 4.8434
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H02266.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.52e-1161795271374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       lv++L++cAeav++++++la+al++++  la ++  +m+++aa+f+eAL +r+++        ++p+++++++ +++l +   f+e+ P+lk 
  Migut.H02266.1.p 179 LVHTLMACAEAVQQENMKLADALVKHVGILAESQVGAMRKVAACFAEALVRRIYK--------IRPQPEENSSYADVLEM--HFYETAPYLK- 260
                       689****************************************************........67777765555555554..5*******97. PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                                         vH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +va++l
  Migut.H02266.1.p 261 ------------------VHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSL 335
                       ..................8************************************************************************** PP

              GRAS 187 edleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklp 276
                       +dl+ ++L++kp   E++aVn+v++lhrll++++++e+    vL  ++ + Pk+v+vveqeadhn+  F++rf e+l+yys++fdsl  ++l 
  Migut.H02266.1.p 336 ADLDAKMLDIKPgdYETVAVNSVFELHRLLARPGAVEK----VLGSIRAMGPKIVTVVEQEADHNGVVFMDRFNESLHYYSTMFDSLeGSGLT 424
                       ************888***********************....*********************************************666777 PP

              GRAS 277 res....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkd 364
                       + +     ++ ++ +++lgr+i+nvvac gaer+erhetl+kWr+r+++aGF+p++l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++
  Migut.H02266.1.p 425 QPDggggGQDLFMTEVYLGRQICNVVACDGAERVERHETLAKWRRRMGSAGFEPAHLGSNAFKQASMLLALFAgGDGYRVEENDGCLMLGWHT 517
                       77688999************************************************************************************* PP

              GRAS 365 rpLvsvSaWr 374
                       rpL+++SaWr
  Migut.H02266.1.p 518 RPLIATSAWR 527
                       *********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF120416.7E-3134101IPR021914Transcriptional factor DELLA, N-terminal
SMARTSM011295.8E-2934109No hitNo description
PROSITE profilePS5098546.927153506IPR005202Transcription factor GRAS
PfamPF035146.8E-114179527IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    Send to blast
MKRDRDRGGK AAAVSGGTTA GKGKMWAEAD AGMDELLAVL GYKVKSSDMA DVAEKLEQLE  60
VAMGTTAMED GVSSLSTDTT VHYNPSDLSG WVGSMLSELS VIPDQIGVSG GGNLINDDDL  120
RAIPGGAILG NDSESAKKRI KFDSRVEFLE NGCSAAAPPP PPLPRAVVLV DSQEAGVRLV  180
HTLMACAEAV QQENMKLADA LVKHVGILAE SQVGAMRKVA ACFAEALVRR IYKIRPQPEE  240
NSSYADVLEM HFYETAPYLK VHVIDFGLKQ GMQWPALMQA LALRPGGPPA FRLTGIGPPQ  300
PDNTDALQQV GWKLAQLAET IGVEFEFRGF VANSLADLDA KMLDIKPGDY ETVAVNSVFE  360
LHRLLARPGA VEKVLGSIRA MGPKIVTVVE QEADHNGVVF MDRFNESLHY YSTMFDSLEG  420
SGLTQPDGGG GGQDLFMTEV YLGRQICNVV ACDGAERVER HETLAKWRRR MGSAGFEPAH  480
LGSNAFKQAS MLLALFAGGD GYRVEENDGC LMLGWHTRPL IATSAWRLTE VE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A4e-4918652626378Protein SCARECROW
5b3h_A3e-4918652625377Protein SCARECROW
5b3h_D3e-4918652625377Protein SCARECROW
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. {ECO:0000250, ECO:0000269|PubMed:15347801}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H02266.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845098.10.0PREDICTED: LOW QUALITY PROTEIN: DELLA protein GAI
SwissprotQ7Y1B60.0GAI_SOLLC; DELLA protein GAI
TrEMBLA0A022QUC10.0A0A022QUC1_ERYGU; Uncharacterized protein
STRINGMigut.H02266.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21262462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein
Publications ? help Back to Top
  1. Nir I, et al.
    The Tomato DELLA Protein PROCERA Acts in Guard Cells to Promote Stomatal Closure.
    Plant Cell, 2017. 29(12): p. 3186-3197
    [PMID:29150547]