PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H02245.1.p
Common NameLOC105965116, MIMGU_mgv1a002203mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 730aa    MW: 81766 Da    PI: 6.884
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H02245.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.13.5e-1950105156
                       TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       +++ ++++++q++ Le++F+++++p+ ++r++L+++lgL+ +q+k+WFqN+R+++k
  Migut.H02245.1.p  50 KKQYHRHSAQQIQHLETFFKECPHPDDNQRRQLSTELGLDPKQIKFWFQNKRTQKK 105
                       688899***********************************************988 PP
2START1402.4e-442454643206
                       HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                       a +a++elv +   +ep+Wv+s+     ++ +d + + f++ +       ++e +++sg v +++ +lve lld++ +W+ +++    ka t+
  Migut.H02245.1.p 245 AIAAMDELVELLRMKEPVWVTSPsdgrYMLHRDSYDKLFPKPNHfksssARMESSKDSGEVAAPAINLVEMLLDSN-KWKDMFPtivtKARTI 336
                       6799*******************6666455555555555443337999999*************************.**************** PP

                       EEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
             START  83 evissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                       +v+++g   g l+lm+ ++  lsplv+ R+f f+Ry+rql+a +wv vdvS d  ++ + ++   R+ +lpSg++ie+ sn +s++tw+eh+ 
  Migut.H02245.1.p 337 DVLDTGsfgGSLHLMYEKMHILSPLVApREFFFIRYCRQLSASSWVMVDVSYDFIKQIQ-DAAPTRSWKLPSGFMIEEISNEKSNITWIEHIQ 428
                       **************************99*****************************99.9******************************** PP

                       --SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 172 lkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                       +++++  h l+r lv  ++a ga++w atlqr ce+
  Migut.H02245.1.p 429 VDDKTLtHRLYRDLVCGCQAYGARRWIATLQRMCER 464
                       **99988***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.76E-1836108IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-2137109IPR009057Homeodomain-like
PROSITE profilePS5007116.63347107IPR001356Homeobox domain
SMARTSM003891.2E-1649111IPR001356Homeobox domain
CDDcd000865.82E-1650108No hitNo description
PfamPF000461.1E-1650105IPR001356Homeobox domain
PROSITE patternPS00027082105IPR017970Homeobox, conserved site
PROSITE profilePS5084841.952234467IPR002913START domain
SuperFamilySSF559619.34E-31235465No hitNo description
CDDcd088751.18E-94238463No hitNo description
SMARTSM002346.0E-32243464IPR002913START domain
PfamPF018521.1E-37245464IPR002913START domain
Gene3DG3DSA:3.30.530.201.9E-8299430IPR023393START-like domain
SuperFamilySSF559618.24E-13487689No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    Send to blast
MCCTLSGNSV VKESQTTSET TIRLRGREMD LPYGRGGSGD EEASDSRKGK KQYHRHSAQQ  60
IQHLETFFKE CPHPDDNQRR QLSTELGLDP KQIKFWFQNK RTQKKAQNER ADNNALRAEN  120
ERIHCENLAM REALKNIMCP ACHGAALGDE ESQQSLQMLR MENARLKEEH ERTMGFFSNY  180
VENSNMPPGT ENLSNVPGNS FPGKRVETTV PLDHEQIPRH PEMINSPYNP SGIKEMDKSI  240
IVETAIAAMD ELVELLRMKE PVWVTSPSDG RYMLHRDSYD KLFPKPNHFK SSSARMESSK  300
DSGEVAAPAI NLVEMLLDSN KWKDMFPTIV TKARTIDVLD TGSFGGSLHL MYEKMHILSP  360
LVAPREFFFI RYCRQLSASS WVMVDVSYDF IKQIQDAAPT RSWKLPSGFM IEEISNEKSN  420
ITWIEHIQVD DKTLTHRLYR DLVCGCQAYG ARRWIATLQR MCERFTYSTG LTARPTHELE  480
GVIDSSEGRR NLMKLSHRMI KNFCEVLGMS DRLDFPYLSE LNNSGVRVSL RKSDGQGQPD  540
GLIVSAATSL WLPFSIENLF KFFRDEKKRA QWDILSSGNP VNAIARISTG ADPGNCISVI  600
QPFVPKENIL ILQESIIDSL GATIVYAPID LPAVSSVVNG EDTMKIPILP SGFIISSDGR  660
FTSNKGSGAS AATSSSTPSG SLLTVAFQIL VCCSSRSKQL NMESVATVHT LISSTIQKIK  720
VALECPDLE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H02245.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845088.10.0PREDICTED: homeobox-leucine zipper protein ROC8-like isoform X2
TrEMBLA0A022QU910.0A0A022QU91_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24902351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0homeodomain GLABROUS 11