PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01880.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 426aa    MW: 46047.4 Da    PI: 6.6728
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01880.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.3e-053133511154
                       HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        R +++ +++  L++l+ +      +K + a++L +A+e+Ik+L
  Migut.H01880.1.p 313 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEATECIKYL 351
                       5778999**********998.....8*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.795302351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.78E-4312356No hitNo description
Gene3DG3DSA:4.10.280.103.5E-7312366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-10312367IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MADDDQFHLG IGNWWDTSSR NRFDGGGGTT PASNIPTTLN ALATFGWPLE TAATASAAAA  60
GAVNRELRMM GLGRLSSQSV DWGQSLFRGE ESMAAESCEQ QWRQKVYSGG VSPEEYSSVH  120
DFKQMNNRGF SLDQSQFSSS QASSNDSTIT SQNNINSGFQ AAADSAAAAY GLLLPENQHS  180
AFQNRSINCP YSSSGYGGGA ATSLSNKYPQ FLRTSCTPQP PPPPESSSSH LHFTNNTPFW  240
NASSVPTTAA AMSTDTHHAR SSFFPPPLQT QISVAPSFDE KPKNGATTKK NNTETSNKRP  300
RNETPSSSPA FKVRKEKMGD RITALQQLVS PFGKTDTASV LSEATECIKY LHGQLSVLSS  360
PYMESEAPIK HQQSFDKSND REGQRQDLRS RGLCLVPISN TYPVTDHETS CAGDFWTPTF  420
GATFR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01880.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841644.10.0PREDICTED: transcription factor bHLH123-like
TrEMBLA0A2G9H4811e-138A0A2G9H481_9LAMI; Uncharacterized protein
STRINGMigut.H01880.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8602486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.14e-52bHLH family protein