PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01817.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 681aa    MW: 76141.2 Da    PI: 4.8376
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01817.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-163683148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEde+l++av ++G ++W tI r  g+ R +k+c++rw++yl
  Migut.H01817.1.p 36 KGAWSKEEDEKLIRAVDEYGLRNWVTIERLSGLARPAKNCRLRWLNYL 83
                      79********************************************97 PP
2Myb_DNA-binding47.63.7e-1591132346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++T++E+ l++++++++G+  W++Ia++++ gR+++++k++w+k
  Migut.H01817.1.p  91 PFTEDEERLILHLHAKHGNS-WSRIAAKLP-GRSDNEIKNFWHK 132
                       79****************99.*********.***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.3583183IPR017930Myb domain
SMARTSM007177.3E-133585IPR001005SANT/Myb domain
SuperFamilySSF466898.99E-2835130IPR009057Homeodomain-like
PfamPF002493.1E-143683IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.5E-203790IPR009057Homeodomain-like
CDDcd001674.78E-113883No hitNo description
PROSITE profilePS5129423.80284138IPR017930Myb domain
SMARTSM007178.5E-1488136IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.5E-2391136IPR009057Homeodomain-like
CDDcd001671.78E-1291132No hitNo description
PfamPF002493.9E-1491132IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    Send to blast
MAVDSHTLTS SCGGGAEMGT GHGGGDDQPA VVVYRKGAWS KEEDEKLIRA VDEYGLRNWV  60
TIERLSGLAR PAKNCRLRWL NYLRPNLKKY PFTEDEERLI LHLHAKHGNS WSRIAAKLPG  120
RSDNEIKNFW HKRAKKCQKH HLPIYPNENH TSGITDKDES VANDGDRFFS NSSGDFVTQN  180
SPQTPISISM PQSSQFLSSP SSLVTSQKHS PTNDQNTPTS QTPQNLLIIS PHHTIQSTET  240
PLDFTMLRKP PILSSPQSTL RRFSRSHSLI ADSSSRAVYS VQTSMETKDS PTASFSPFQL  300
KSPMSAPLSP LQLRLSMPAP SESCFQSNLS VPDSTFSPCV QPMTVDTDNF VTNNSPPPVL  360
ENCPSFKFYQ QGVDNSGGVH KVEEGDSNLE VMEELREAQE RVRFLKKKLK QQTTKNVVGK  420
VHAHLKNSTK KESLKRKGDA SGVSQVKTAR RDKGEDLEKV QQNENSESLS AETLQIKEDT  480
LGEIFNEQSD WIDFLDSNSC DDVLCPIVGP TGKCSNERST MQDSFFEEDL FGQRYEIQGG  540
EEFGYTSGQD YFSDYCDPNL ISPNQYTGPD PLDSGYLLTQ PTAMEQEPSA EQNLWTQAQM  600
VSQDQTLPTQ GFDSFANPTE SKNCWNYESG KVELKEEQEQ ENMDTIMPDD LSSLLEFFPT  660
NNQTVEWYNI GDAISISDYI *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C7e-25361364103C-Myb DNA-Binding Domain
1msf_C7e-25361364103C-Myb DNA-Binding Domain
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1404410LKKKLKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01817.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841759.10.0PREDICTED: uncharacterized protein LOC105962037
TrEMBLA0A022R4940.0A0A022R494_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2287222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26930.14e-41myb domain protein 97