PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01666.1.p
Common NameLOC105962149, MIMGU_mgv1a020653mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 527aa    MW: 59665.1 Da    PI: 4.9371
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01666.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS324.32.5e-991445231374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.......sseelaalklfse 86 
                       lv+lLl+cAea+  +d +la+++La++  ++s  gd+mqR+ ++f+ +L++rl+   +++    + ++t+++        ++e+  a+ l+++
  Migut.H01666.1.p 144 LVHLLLACAEAIGCRDGNLANSILAQIWPRVSAFGDSMQRVSHCFAVGLKSRLSL-LHSINPNGSFNTTNNRAnldlpliTEEKSEAFYLLHQ 235
                       68***************************************************98.5555544444444433356999998999999999*** PP

              GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLa...kfAeelgvp 175
                       ++P++ f++ +aN aI +a++g++ +Hi+D+++++ +QWp L ++La R+egpp  +R+Tg++  ++++++ l e++  L+   + A +lg  
  Migut.H01666.1.p 236 TTPYIAFGYAAANDAIFRAASGKSSLHIVDLGMEHNFQWPMLVRKLAFRKEGPPkIIRLTGIVGRDNNNQKLLLELECSLKslcEEAVSLGTF 328
                       **************************************************8888689*****9989887777777776666111556689*** PP

              GRAS 176 fefnvlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
                       +e+++++++ +  +l+ e+L   ++Eal Vn++++lh+ + es  + +   ++L+++k+l+P++++vveq+a+hn++ Fl rfle+l+yysa+
  Migut.H01666.1.p 329 VEYHLVHEQvSPLSLTREKLYAGEEEALFVNSIMHLHKHVGESRGSLK---NILQAIKKLKPTLLTVVEQDANHNGPFFLGRFLESLHYYSAV 418
                       ****96444444566789999999**************9966654444...7***************************************** PP

              GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
                       fdslea+lpr  e r+k+Er+ ++ ei+nvva eg++r+erhe++ +Wr++l++ GF+ v l+    ++++++++ +++ gy+v  e+g+l l
  Migut.H01666.1.p 419 FDSLEATLPRSCERRRKIERAHFADEIQNVVAYEGSDRFERHERADQWRRQLGRGGFQVVGLK--CLDEVEAMVAACGGSGYTVAGEKGCLQL 509
                       ************************************************************996..78999*********************** PP

              GRAS 361 gWkdrpLvsvSaWr 374
                       gWk+rp++++SaW+
  Migut.H01666.1.p 510 GWKGRPIMFASAWQ 523
                       *************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098548.151118505IPR005202Transcription factor GRAS
PfamPF035148.5E-97144523IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MEESMISNGW INLPTFENFD QSDHAIRQFC PARVAQEEQE NNFEITWPRY FGSEAPQPPP  60
QFDIDEIFDT FFNVECYEKD NNALNYFSQD QDRDQEETLI NEPFYHHFQL DEEDDDLMID  120
VEELDRSDGA DCSITIGVDQ GLHLVHLLLA CAEAIGCRDG NLANSILAQI WPRVSAFGDS  180
MQRVSHCFAV GLKSRLSLLH SINPNGSFNT TNNRANLDLP LITEEKSEAF YLLHQTTPYI  240
AFGYAAANDA IFRAASGKSS LHIVDLGMEH NFQWPMLVRK LAFRKEGPPK IIRLTGIVGR  300
DNNNQKLLLE LECSLKSLCE EAVSLGTFVE YHLVHEQVSP LSLTREKLYA GEEEALFVNS  360
IMHLHKHVGE SRGSLKNILQ AIKKLKPTLL TVVEQDANHN GPFFLGRFLE SLHYYSAVFD  420
SLEATLPRSC ERRRKIERAH FADEIQNVVA YEGSDRFERH ERADQWRRQL GRGGFQVVGL  480
KCLDEVEAMV AACGGSGYTV AGEKGCLQLG WKGRPIMFAS AWQMHN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_A3e-4615152225377Protein SCARECROW
5b3h_D3e-4615152225377Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01666.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841885.10.0PREDICTED: DELLA protein RGA2-like
TrEMBLA0A022R1D80.0A0A022R1D8_ERYGU; Uncharacterized protein
STRINGMigut.H01666.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA140671113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.12e-65GRAS family protein