PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H01640.1.p | ||||||||
Common Name | LOC105962173, MIMGU_mgv1a014405mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | G2-like | ||||||||
Protein Properties | Length: 191aa MW: 20727.2 Da PI: 6.5063 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 29.9 | 1.2e-09 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+vkgLtl h+kSHLQkYRl Migut.H01640.1.p 1 MSVKGLTLFHLKSHLQKYRL 20 99*****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.6E-8 | 1 | 21 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 6.1E-15 | 61 | 105 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MSVKGLTLFH LKSHLQKYRL GKQSGKEFGE ASKDGSYHLD SPRASTPPQN LLSSDMNMGY 60 EVKEALRAQM EVQSKLHLQV EAEKHVQIRQ NAESRYMAML ERACEMFANQ ILGAADTSND 120 GDGYEGKGTE SCLTSHESCV GFLPEGSSKR RVINTGSANA SFVWGESDAY TPDLHLVQVS 180 NSHGIAGCGV * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H01640.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012841920.1 | 1e-141 | PREDICTED: myb family transcription factor APL-like | ||||
Swissprot | Q94A57 | 5e-29 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | A0A022R4S3 | 1e-140 | A0A022R4S3_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9764 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 2e-31 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.H01640.1.p |
Entrez Gene | 105962173 |
Publications ? help Back to Top | |||
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