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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.H01617.1.p |
| Common Name | LOC105962196, MIMGU_mgv1a005915mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
GRAS |
| Protein Properties |
Length: 466aa MW: 52301.1 Da PI: 5.9488 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.H01617.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 402.5 | 4.2e-123 | 90 | 465 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlela....qalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
l++lL++cAe +s +d ++a +alL l++++s gdp+qRl ay++e+L+arl++s+s +yk+l+++e + sse ++++++++e++P
Migut.H01617.1.p 90 LKQLLVACAETISYSDGKMAvstfEALLRILEKRVSVCGDPLQRLGAYMLEGLRARLLSSGSIIYKKLKCREPT---SSELMSYMQVLYEICP 179
689***********99887634436788999999***************************************9...9*************** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
++kf+++ aN I ea+++e+r+HiiDf+i qG QW++++q +++Rp+gpp +RiTgv+++es + l +g+rLa++Ae++gv+fefn
Migut.H01617.1.p 180 YYKFAYISANVVIEEAMQNEKRIHIIDFQIAQGSQWVSFIQDISCRPGGPPCVRITGVDDSESAhaRGGGLDLVGRRLAQVAESCGVHFEFNG 272
************************************************************9888889999*********************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
++++ e ++L++++gEalaV++ + lh+++desvs+ ++rd++L+lvk+lsPkv++++eqe+++n+++Fl+rf e+l+yy+ +f+s++a
Migut.H01617.1.p 273 AAMSENEVELCNNLEIRNGEALAVSFPYVLHHIPDESVSTLNQRDRLLRLVKGLSPKVLTLAEQESNTNTSTFLQRFYETLDYYTNMFESIDA 365
766666666689********************************************************************************* PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
+re+++ri+ E++++++++vn++aceg++r+erhe ++kW+ rl++aGF+++pls+++ ++++ +l ++++ yrv e +g+l+l Wk+r+
Migut.H01617.1.p 366 ARSREDRQRINAEEHCVAKDVVNIIACEGDDRVERHELFGKWKLRLTMAGFTQMPLSSSVSDSIRVMLGGYSWN-YRVVEGNGALYLAWKNRA 457
*9**********************************************************************66.****************** PP
GRAS 367 LvsvSaWr 374
Lv++SaWr
Migut.H01617.1.p 458 LVTASAWR 465
*******8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MQEPQTYHQT IKPYYFSNQF YTLESTPPTC NNATHSSASS ASISSNRSPF SPQLHHSSDN 60
NTYEVVGPEC DIDHSPSFNR ILEIAPQMDL KQLLVACAET ISYSDGKMAV STFEALLRIL 120
EKRVSVCGDP LQRLGAYMLE GLRARLLSSG SIIYKKLKCR EPTSSELMSY MQVLYEICPY 180
YKFAYISANV VIEEAMQNEK RIHIIDFQIA QGSQWVSFIQ DISCRPGGPP CVRITGVDDS 240
ESAHARGGGL DLVGRRLAQV AESCGVHFEF NGAAMSENEV ELCNNLEIRN GEALAVSFPY 300
VLHHIPDESV STLNQRDRLL RLVKGLSPKV LTLAEQESNT NTSTFLQRFY ETLDYYTNMF 360
ESIDAARSRE DRQRINAEEH CVAKDVVNII ACEGDDRVER HELFGKWKLR LTMAGFTQMP 420
LSSSVSDSIR VMLGGYSWNY RVVEGNGALY LAWKNRALVT ASAWR*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
