PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H01517.1.p | ||||||||
Common Name | LOC105951614, MIMGU_mgv1a020333mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | HSF | ||||||||
Protein Properties | Length: 293aa MW: 33201.3 Da PI: 5.4548 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 103.5 | 1.8e-32 | 31 | 124 | 1 | 102 |
HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 aFl+k+++i++d++++++isws +g+sf+++++++f+ ++Lp yFkhsn+aSFv QLn YgF+k+ ++ we+++++F++gk +l Migut.H01517.1.p 31 AFLTKTFNIVNDPNTDSVISWSLSGDSFIIWNHHKFSAEILPVYFKHSNLASFVYQLNSYGFRKIGVIHQ--------WEYENPNFQAGKGNL 115 69****************************************************************9994........*************** PP XXXXXXXXX CS HSF_DNA-bind 94 lekikrkks 102 l++i+r+k+ Migut.H01517.1.p 116 LSNIRRRKR 124 ******986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46785 | 1.09E-29 | 28 | 122 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM00415 | 2.6E-48 | 28 | 122 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Gene3D | G3DSA:1.10.10.10 | 2.0E-31 | 29 | 122 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Pfam | PF00447 | 1.6E-28 | 32 | 122 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 4.7E-17 | 32 | 55 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 4.7E-17 | 70 | 82 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 4.7E-17 | 83 | 95 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MNCSTCSGGV GGGTTNSVAG SEERRYLGPP AFLTKTFNIV NDPNTDSVIS WSLSGDSFII 60 WNHHKFSAEI LPVYFKHSNL ASFVYQLNSY GFRKIGVIHQ WEYENPNFQA GKGNLLSNIR 120 RRKRNVCSGT YITISPEIVM NEINESKLEI EKLEHEITAV QEKVENIYKH KLLKKQTRGE 180 VFARKTMIEE IGKEIHARKK RKFISLTTEN TEKNHGSENQ PVLSTDEYSE VVIDATLEEG 240 SMAKNADDYT FWTKILLEDY EACEAENIVM DFESSIAKVD NQEGERVIID LN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ldu_A | 3e-27 | 30 | 126 | 18 | 124 | Heat shock factor protein 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H01517.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012830517.1 | 0.0 | PREDICTED: heat stress transcription factor A-7a-like | ||||
TrEMBL | A0A022RWS0 | 0.0 | A0A022RWS0_ERYGU; Uncharacterized protein | ||||
STRING | Migut.H01517.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16875 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 4e-36 | heat shock transcription factor A2 |
Link Out ? help Back to Top | |
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Phytozome | Migut.H01517.1.p |
Entrez Gene | 105951614 |