PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H01448.1.p | ||||||||
Common Name | LOC105951434, MIMGU_mgv1a012656mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 27365.1 Da PI: 6.3058 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.3 | 5e-12 | 68 | 114 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR++iN f Lr l+P + +K++Ka+ L +++ +k+L Migut.H01448.1.p 68 KSHSEAERRRREKINAHFTSLRGLVPDS-----EKMDKAALLAEVISQVKQL 114 58************************98.....8************999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.624 | 65 | 114 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-9 | 68 | 114 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.39E-10 | 68 | 116 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.2E-14 | 69 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.57E-13 | 69 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.1E-13 | 71 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF55021 | 6.56E-9 | 152 | 220 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 8.6E-11 | 152 | 223 | No hit | No description |
PROSITE profile | PS51671 | 10.164 | 153 | 232 | IPR002912 | ACT domain |
CDD | cd04873 | 1.85E-8 | 154 | 216 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MYCESNWGEL MNQLSRYPIG FTENRVSGET PFRQSLVLDG EKGELVKSSV KLGKKIEGLE 60 TKTMAALKSH SEAERRRREK INAHFTSLRG LVPDSEKMDK AALLAEVISQ VKQLKTTAKQ 120 ASEGLHIPMD TDEVQVEVLD NNNNAINGSF LLRVSLCCEY RPDLLSEVRQ ALSILRARIL 180 ESEISTLGGR VKTVFLVTTE EETNENAVRS ALSNVLDKLS ASAEYDQELF FPRKRQRVSC 240 VDSL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 78 | ERRRRE |
2 | 74 | 79 | RRRREK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H01448.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012830318.1 | 1e-180 | PREDICTED: transcription factor bHLH30-like | ||||
TrEMBL | A0A022RTG1 | 1e-178 | A0A022RTG1_ERYGU; Uncharacterized protein | ||||
STRING | Migut.H01448.1.p | 1e-179 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6730 | 22 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25710.1 | 3e-32 | basic helix-loop-helix 32 |
Link Out ? help Back to Top | |
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Phytozome | Migut.H01448.1.p |
Entrez Gene | 105951434 |