PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01308.1.p
Common NameMIMGU_mgv1a023790mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 295aa    MW: 33268.9 Da    PI: 4.4988
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01308.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-09170213755
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +  r+RR++i ++ +eL +l+P       +K++ ae+L+ A +YIk Lq
  Migut.H01308.1.p 170 ASARQRRRKITEKTHELGKLVPGG-----QKMNTAEMLQSAYKYIKFLQ 213
                       5679******************86.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.522163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.16E-9166216No hitNo description
Gene3DG3DSA:4.10.280.108.3E-12167219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-11169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-12170229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-7170213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MNTDTSFLAQ QETNLFPDQF FDYDSFDELF PDSSYSNEID HLFQPNDILY SQNYNNNNNN  60
NNNIPNQLPY NNNNNNLLTP LPDYTLHTPL VEFDPFQDLK RQKLFDTYNF PLHSDQLINP  120
SLLQHNFQPE FVLPEFVAAP PVYSGGSYAE TVTKPPPAAS GGGSLSAQSA SARQRRRKIT  180
EKTHELGKLV PGGQKMNTAE MLQSAYKYIK FLQAEVGILD SMGSYNHQGN GDQSELLHGL  240
ITSPLIQEKL YSAEKCLVPE KFVQALANDD DTTLESKPQL RKEINELRII DLSN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01308.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830439.10.0PREDICTED: transcription factor bHLH52-like
TrEMBLA0A022RW680.0A0A022RW68_ERYGU; Uncharacterized protein
STRINGMigut.H01308.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-26bHLH family protein