PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H01143.1.p

Common Name

LOC105976960, MIMGU_mgv1a010119mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

BBR-BPC

Protein Properties

Length: 322aa MW: 36117.8 Da PI: 8.4697

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H01143.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	300.6	5.9e-92	6	321	23	301
GAGA_bind 23 nlglq.lmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla.......salpvgvqvlsgtks 107 +lg++ m++ aerda+irern+al e+k a+aerdma lqrd+a+aern a+ erd+++++l ++e ++ ++ ++ +sg++ Migut.H01143.1.p 6 HLGIKtFMAITAERDAAIRERNMALEERKRAFAERDMAMLQRDAAIAERNSAIQERDEAIASLRFRESPMNhnstntnIPDSLVSELSSGARR 98 566542688888*************************************************999988776655433222233455566666 PP GAGA_bind 108 idslqqlse..........pqledsavelreeeklealpieeaaeeake...kkkkkkrqrakkpkekkakkkkkksekskkkvkkesader. 186 i+ +q++ ++ ++++ + ++ + + ++ ++eea+e ++k++++++ak+ k++k++++ k ++ +k+ ++ Migut.H01143.1.p 99 IQYQDQIRAvsepaaynnnNNNNNNSNNSQRGSLRGSSDVSITEEEASEtaaNNKPRRGRQAKDRKANKSQRVGK---RMAEELSKQIITNDw 188 666555443667777665422223333333333333444444444444400044444455555555555554444...333333333332224 PP GAGA_bind 187 ...................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKm 260 ++ ++k +l+ln++++Des++PvPvC+CtGa++ CY+WGnGGWqSaCCtt+iS+yPLP+++++r +R++grKm Migut.H01143.1.p 189 snnnnnsnehdfesdeedkQQVSWK-DNLGLNQINFDESAMPVPVCTCTGAPQPCYRWGNGGWQSACCTTAISMYPLPQVANKRYSRVGGRKM 280 4567888999999999985555565.58************************************************************* PP GAGA_bind 261 SqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 S++af+klL++La+eGyd+s p+DLkdhWAkHGtn++ t++ Migut.H01143.1.p 281 SGSAFSKLLNRLASEGYDFSAPLDLKDHWAKHGTNRYSTLK 321 ***********************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01226	1.5E-102	1	321	IPR010409	GAGA-binding transcriptional activator
Pfam	PF06217	5.8E-85	5	321	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MDHNHHLGIK TFMAITAERD AAIRERNMAL EERKRAFAER DMAMLQRDAA IAERNSAIQE 60 RDEAIASLRF RESPMNHNST NTNIPDSLVS ELSSGARRIQ YQDQIRAVSE PAAYNNNNNN 120 NNNSNNSQRG SLRGSSDVSI TEEEASETAA NNKPRRGRQA KDRKANKSQR VGKRMAEELS 180 KQIITNDWSN NNNNSNEHDF ESDEEDKQQV SWKDNLGLNQ INFDESAMPV PVCTCTGAPQ 240 PCYRWGNGGW QSACCTTAIS MYPLPQVANK RYSRVGGRKM SGSAFSKLLN RLASEGYDFS 300 APLDLKDHWA KHGTNRYSTL K*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H01143.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012857685.1	0.0	PREDICTED: protein BASIC PENTACYSTEINE6-like
Refseq	XP_012857686.1	0.0	PREDICTED: protein BASIC PENTACYSTEINE6-like
TrEMBL	A0A022PVV9	0.0	A0A022PVV9_ERYGU; Uncharacterized protein
STRING	Migut.H01143.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8062	22	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38910.1	2e-72	basic pentacysteine 5

Link Out ? help Back to Top
Phytozome	Migut.H01143.1.p
Entrez Gene	105976960