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Plant Transcription
Factor Database
Previous version:
v3.0
v4.0
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Migut.H00996.1.p |
| Common Name | MIMGU_mgv1a018392mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
GRAS |
| Protein Properties |
Length: 575aa MW: 63293 Da PI: 5.0779 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.H00996.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 327.4 | 2.9e-100 | 231 | 567 | 3 | 347 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
++L++cA+ +s++d e+a a L +l++ +s gdp++R+ yf eAL +r++ +a ++s+ +++s+e + ++k++++++P+ kf+h
Migut.H00996.1.p 231 KALIDCAR-LSESDPENAMASLIQLQDSVSRVGDPVERVSYYFSEALCSRVST------RAEKTSTIYDTTSEEFTLSYKALNDACPYSKFAH 316
79*****9.6778***************************************9......4444444445558999****************** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
ltaNqaIlea+e+++++Hi+Df+i qG+QW+a+lqaLa+Rp+g+p ++Ri g+ +p+ g + +l +tg+rL++fA+ l+++fef++ + +
Migut.H00996.1.p 317 LTANQAILEATEKANKIHIVDFGIVQGIQWAAFLQALATRPSGKPdRIRISGIPAPSLGnsPAASLFATGNRLRDFAKLLDLRFEFDP-ILTP 408
*****************************************87777**********999889999***********************.799* PP
GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
+++le +++rv+p+E+laVn++lql++lldes + + + Lkl ksl+P vv++ e e+++n+ Fl+rf + l+yy+a+f+sle +l+r+
Migut.H00996.1.p 409 VHELEGSSFRVDPDEVLAVNFMLQLYNLLDESNDGVE---DALKLAKSLNPCVVTLGEYEVSLNRVGFLHRFKNGLKYYTAIFESLEPGLARD 498
*****************************99988887...9**************************************************** PP
GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sd 347
s er Er llgr+i vv e+++ rer+e +e+Wr +e aGF+p+ +s++a++qak ll ++ s
Migut.H00996.1.p 499 SPERLQAERLLLGRRIAGVVGPEERK-RERMEDKERWRFLMEGAGFQPLVFSHYAQSQAKILLWNYTnSS 567
************************98.9*************************************99444 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 575 aa
Download sequence Send
to blast |
MAYMCTDSGN LMAIAQQVIK QKQQQEQQQQ QQLHTINPFS SWPHHQTPNS APPLAYGLTA 60
GFTDPFQVPP GPESADPGFP FPNLDHHHHH STGFRFSDLC GGPGGEFDSD EWMESLMGGG 120
DSTESSNLQT DCDAWQTSSE FSHLYPTDPF PSRLSINSPP PSDLSRVIFP EPPPTSTWVA 180
PSSVSLPPTT KLQQSKPVIT TKLDAAAAST AAGGASTSSP EDSPKAKPIL KALIDCARLS 240
ESDPENAMAS LIQLQDSVSR VGDPVERVSY YFSEALCSRV STRAEKTSTI YDTTSEEFTL 300
SYKALNDACP YSKFAHLTAN QAILEATEKA NKIHIVDFGI VQGIQWAAFL QALATRPSGK 360
PDRIRISGIP APSLGNSPAA SLFATGNRLR DFAKLLDLRF EFDPILTPVH ELEGSSFRVD 420
PDEVLAVNFM LQLYNLLDES NDGVEDALKL AKSLNPCVVT LGEYEVSLNR VGFLHRFKNG 480
LKYYTAIFES LEPGLARDSP ERLQAERLLL GRRIAGVVGP EERKRERMED KERWRFLMEG 540
AGFQPLVFSH YAQSQAKILL WNYTNSSFYK LLDS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
