PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H00971.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | E2F/DP | ||||||||
Protein Properties | Length: 124aa MW: 13730.8 Da PI: 9.74 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 30.7 | 5.3e-10 | 9 | 53 | 1 | 39 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse......dv 39 rkeksL+lltq+f+kl+ +++ + ++l+++ak L+ + + Migut.H00971.1.p 9 RKEKSLGLLTQNFVKLFLCTDMDLISLEDAAKLLLGDgkhtsmTT 53 79********************************99988775533 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.10 | 9.8E-7 | 6 | 43 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM01372 | 0.0046 | 9 | 91 | IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005667 | Cellular Component | transcription factor complex | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence Send to blast |
MASKYGENRK EKSLGLLTQN FVKLFLCTDM DLISLEDAAK LLLGDGKHTS MTTRTKRFKV 60 DEDGLQILKP VNLMRVKNET ENEDDRTTTM GAKSYQFGPF APANVPQVGV SNDYKGKQVV 120 KKG* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Inhibitor of E2F-dependent activation of gene expression. Binds specifically the E2 recognition site without interacting with DP proteins and prevents transcription activation by E2F/DP heterodimers. Controls the timing of endocycle onset and inhibits endoreduplication. {ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11867638, ECO:0000269|PubMed:15649366, ECO:0000269|PubMed:18787127}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H00971.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012837794.1 | 3e-40 | PREDICTED: E2F transcription factor-like E2FE isoform X3 | ||||
Refseq | XP_012846959.1 | 6e-40 | PREDICTED: E2F transcription factor-like E2FE isoform X1 | ||||
Refseq | XP_012846960.1 | 5e-40 | PREDICTED: E2F transcription factor-like E2FE isoform X2 | ||||
Refseq | XP_012846961.1 | 2e-40 | PREDICTED: E2F transcription factor-like E2FE isoform X3 | ||||
Swissprot | Q8LSZ4 | 2e-14 | E2FE_ARATH; E2F transcription factor-like E2FE | ||||
TrEMBL | A0A022QN48 | 2e-38 | A0A022QN48_ERYGU; Uncharacterized protein (Fragment) | ||||
TrEMBL | A0A022RAA4 | 1e-38 | A0A022RAA4_ERYGU; Uncharacterized protein (Fragment) | ||||
TrEMBL | A0A022RPY3 | 1e-37 | A0A022RPY3_ERYGU; Uncharacterized protein | ||||
STRING | Migut.H00971.1.p | 4e-86 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 5e-16 | DP-E2F-like 1 |
Link Out ? help Back to Top | |
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Phytozome | Migut.H00971.1.p |
Publications ? help Back to Top | |||
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