PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00921.1.p
Common NameMIMGU_mgv1a009700mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 347aa    MW: 38967.8 Da    PI: 5.6649
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00921.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.8e-181461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd  lv +v+++G+g+W+++++t g++R+ k+c++rw +yl
  Migut.H00921.1.p 14 KGPWTPEEDIMLVSYVQEHGPGNWRAVPSTTGLRRCSKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding48.32.3e-1567112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg +T +E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Migut.H00921.1.p  67 RGTFTDQEEKMIIQLQALLGNK-WAAIASYLP-ERTDNDIKNYWNTHL 112
                       899*******************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.3E-24564IPR009057Homeodomain-like
PROSITE profilePS5129425.16965IPR017930Myb domain
SuperFamilySSF466895.75E-3111108IPR009057Homeodomain-like
SMARTSM007177.3E-141363IPR001005SANT/Myb domain
PfamPF002492.9E-161461IPR001005SANT/Myb domain
CDDcd001671.43E-101661No hitNo description
Gene3DG3DSA:1.10.10.608.0E-2565117IPR009057Homeodomain-like
SMARTSM007178.7E-1666114IPR001005SANT/Myb domain
PROSITE profilePS5129420.19366116IPR017930Myb domain
PfamPF002491.4E-1467112IPR001005SANT/Myb domain
CDDcd001671.06E-1069111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MGRPPCCEKV GVKKGPWTPE EDIMLVSYVQ EHGPGNWRAV PSTTGLRRCS KSCRLRWTNY  60
LRPGIKRGTF TDQEEKMIIQ LQALLGNKWA AIASYLPERT DNDIKNYWNT HLKKKLKKLQ  120
TGSGDDDRPG SGHGLLSHSI SRGQWERRLQ ADITTAKQAL EDALSFDKNN DNNINNNLGS  180
ESSFSYNNKP SSTTTHHQGF SYASSTENIA KLLKDWVKST PKNDEYSKCS STQNSSNNAV  240
DLYEEKPTPC TYNNNNNNDS NKSKSGIDLS EAFESLFGFE TFENFESSNS DEFSRSASPS  300
DLVHDEIKPD PVSLAPLSVL ENWLLDDQGK DYLTNFSFDD HNPDLF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C1e-251411627128MYB TRANSFORMING PROTEIN
1mse_C9e-26141164105C-Myb DNA-Binding Domain
1msf_C9e-26141164105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000305}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00921.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841357.10.0PREDICTED: myb-related protein 306-like
SwissprotP813921e-103MYB06_ANTMA; Myb-related protein 306
TrEMBLA0A022R2900.0A0A022R290_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.16e-90myb domain protein 94
Publications ? help Back to Top
  1. Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C
    Expression patterns of myb genes from Antirrhinum flowers.
    Plant Cell, 1991. 3(2): p. 115-25
    [PMID:1840903]