PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00906.1.p
Common NameLOC105961676, MIMGU_mgv1a011172mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 291aa    MW: 32963.7 Da    PI: 6.6059
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00906.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-1875128356
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rqV +WFqNrRa++k
  Migut.H00906.1.p  75 KKRRLNMEQVKALEKSFELGNKLEPERKVQLARALGLQPRQVAIWFQNRRARWK 128
                       456899***********************************************9 PP
2HD-ZIP_I/II133.95.6e-4374165192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       ekkrrl+ eqvk+LE+sFe  +kLeperKv+lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++dalk++n++L++++++L+++l 
  Migut.H00906.1.p  74 EKKRRLNMEQVKALEKSFELGNKLEPERKVQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDALKSDNDSLKSHNKKLQTQLV 165
                       69**************************************************************************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.67E-1969132IPR009057Homeodomain-like
SMARTSM003894.8E-1973134IPR001356Homeobox domain
PROSITE profilePS5007116.7374130IPR001356Homeobox domain
CDDcd000865.59E-1775131No hitNo description
PfamPF000466.7E-1675128IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.3E-1977137IPR009057Homeodomain-like
PRINTSPR000319.1E-6101110IPR000047Helix-turn-helix motif
PROSITE patternPS000270105128IPR017970Homeobox, conserved site
PRINTSPR000319.1E-6110126IPR000047Helix-turn-helix motif
PfamPF021831.1E-16130169IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAFIPESMFR NHDDHTHFPT SSPNCAPQDF QGVTEYLMRR SMSLTGGGGM DRGEEYQQDD  60
DVSDDGSQMM MLGEKKRRLN MEQVKALEKS FELGNKLEPE RKVQLARALG LQPRQVAIWF  120
QNRRARWKTK QLEKDYDVLK RQFDALKSDN DSLKSHNKKL QTQLVCLKAA RESTVGIINL  180
NKDNEGSNWS NGSENSSEVN LNKTSSTTDT TLFFPNHHQN NNNNKNGAVY PPAISPNFTQ  240
LLHMSSSRPA AAADHIQPPP VSNECFGTMF GGIEETQEFW PWPAEQQNFH *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122130RRARWKTKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00906.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841374.10.0PREDICTED: homeobox-leucine zipper protein HOX21-like
SwissprotQ8S7W94e-73HOX21_ORYSJ; Homeobox-leucine zipper protein HOX21
TrEMBLA0A022R3B20.0A0A022R3B2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8482498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.12e-60HD-ZIP family protein