PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00893.1.p
Common NameMIMGU_mgv1a018828mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family AP2
Protein Properties Length: 355aa    MW: 40163.9 Da    PI: 9.7083
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00893.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.51.2e-1153109155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+++GV+ ++++gr++A+++d  ++n   k+k  + g ++ +e Aa+a++ a++k++g
  Migut.H00893.1.p  53 SKFRGVSKHRWTGRYEAHLWDkLTWNItqKKKGKQ-GAYDDEEAAARAYDLAALKYWG 109
                       79*******************77777784446666.99***9**************98 PP
2AP252.61.2e-16152203155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  Migut.H00893.1.p 152 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 203
                       89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.11E-1453119IPR016177DNA-binding domain
PfamPF008473.7E-853109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.0E-1254118IPR001471AP2/ERF domain
PROSITE profilePS5103217.89954117IPR001471AP2/ERF domain
SMARTSM003804.6E-1754123IPR001471AP2/ERF domain
PRINTSPR003672.5E-55566IPR001471AP2/ERF domain
CDDcd000182.15E-24152213No hitNo description
SuperFamilySSF541715.3E-18152213IPR016177DNA-binding domain
PfamPF008474.2E-12152203IPR001471AP2/ERF domain
PROSITE profilePS5103218.953153211IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-18153212IPR001471AP2/ERF domain
SMARTSM003802.7E-26153217IPR001471AP2/ERF domain
PRINTSPR003672.5E-5193213IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MRMVKSEDNL GKTHARKRRR RDAVISYGDD GQETENRQAG PASVGPTTVK RSSKFRGVSK  60
HRWTGRYEAH LWDKLTWNIT QKKKGKQGAY DDEEAAARAY DLAALKYWGN STFTNFPISD  120
YKTEIEIMQN MTKEEYLASL RRKSSGFSRG VSKYRGVARH HHNGRWEARI GRVFGNKYLY  180
LGTYSTQEEA ARAYDIAAIE YRGINAVTNF DLSTYIRWLK PGANISEPAQ ETKQSTEFAV  240
SVSPFVREEG SLSLPCLKRK AFGSNEENDV QEMFSSRVPI SPCGKSSPTA LGLLFRSSLF  300
RELLEKNSNV SEDENDGGTT KNLMKARSED EYEGMFCGGN TWFVFSSFGD LLRM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11519RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00893.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098579.11e-166AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A022R2C30.0A0A022R2C3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34402145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-75AP2 family protein