PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00566.1.p
Common NameLOC105971809, MIMGU_mgv1a009529mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CO-like
Protein Properties Length: 340aa    MW: 36975.9 Da    PI: 6.649
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00566.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box27.85.1e-092571242
          zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                      + ++C+ ++  ++ + C+ ++  lC+ C + +H+       H +vp+
  Migut.H00566.1.p 25 RVWMCDACDLAPAAFLCKADSASLCAACDSDIHSAnplarrHIRVPI 71
                      5789*****************************66788888988876 PP
2CCT68.61.6e-23291334144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       Rea+++RY+eK+k RkFeK+irY+sRKa+Ae+RpRvKGrF+k++
  Migut.H00566.1.p 291 REARVMRYREKKKMRKFEKTIRYASRKAYAETRPRVKGRFAKRS 334
                       9****************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003369.0E-152471IPR000315B-box-type zinc finger
PROSITE profilePS5011910.5232471IPR000315B-box-type zinc finger
PfamPF006436.3E-72671IPR000315B-box-type zinc finger
CDDcd000215.25E-82771No hitNo description
PfamPF062038.8E-18291333IPR010402CCT domain
PROSITE profilePS5101716.708291333IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009658Biological Processchloroplast organization
GO:0009909Biological Processregulation of flower development
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MLKVENTTGA GDAGNNWLSS SRRDRVWMCD ACDLAPAAFL CKADSASLCA ACDSDIHSAN  60
PLARRHIRVP ISSAAGNFYG HSAPGLSMGA PEAHSENDFL THHDGEDEDE AASWLLLNPV  120
KNEDNQSSHD NAPPLFGGGG AAAAVDAYLD LDDYNSCQNN QFNDHHHYNN NINHHPKLHY  180
SSVSHEKIGY GGQDSVVPIQ IQEHCFPVGL DYESSHTGYS YPTSMSSHNN VCLSPVMDVG  240
VVPESTMSEG SIISGQYQRT PKGTIDLFSG PLIQAAGVAP PPAQQLSPVD REARVMRYRE  300
KKKMRKFEKT IRYASRKAYA ETRPRVKGRF AKRSVSCAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1298304REKKKMR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00566.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852164.10.0PREDICTED: zinc finger protein CONSTANS-LIKE 2
TrEMBLA0A022RW310.0A0A022RW31_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52482337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02380.17e-62CONSTANS-like 2