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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.H00362.1.p |
Common Name | MIMGU_mgv1a0235351mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
GRAS |
Protein Properties |
Length: 438aa MW: 48481.2 Da PI: 5.9351 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H00362.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 285.9 | 1.2e-87 | 63 | 433 | 2 | 345 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykal...ppsetseknsseelaalkl..fsevs 88
++lL++cA+a++++d++laq++L+ l+++a pdgd++qRl+ f++AL +r a s++ +l +a+ ++ ++++++s++++++ +l f++++
Migut.H00362.1.p 63 EQLLVHCATAIETNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALISRAAMSGNcKLLSAVanvHAASDPTTTSTHRFSIIELasFVDLT 155
79***********************************************999874432444444211222333334666666666678***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfef 178
P+++f++ +aN a+leaveg vHi+D+++++++Q p+L++a+a+R +gpp +++T+ g++e + ++ee+g +L +fA++ +v +ef
Migut.H00362.1.p 156 PWHRFGFTAANAAVLEAVEGYPVVHIVDLSLTHCMQIPTLIDAIAARLDGPPLVKLTVAGAMEDFppmLDLSYEELGTKLVNFARSRNVAMEF 248
*************************************************************999898888999******************** PP
GRAS 179 nvl.......vakrledleleeLrvkp..gEalaVnlvlqlhrll..........desvsleserdevLklvkslsPkvvvvveqeadhnses 252
+v+ ++ +++l++++Lr + +Eal++n++++lh+++ e+++ +s r+ +Lk+v++l P+vvv+v+++ad +s++
Migut.H00362.1.p 249 RVVpstssngFSSLIDQLRMQQLRRAEngREALVINCHMMLHYIPeeeeehqtltYETAAAASLRTMFLKAVRGLDPTVVVLVDEDADFTSGN 341
***998777666778888999998877899***************9999999999889999999***************************** PP
GRAS 253 FlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
++ r+ +a +y + +d++++ lpr s++r+++E+ + ++i+nvv++eg++r+er e ++kW +r+++aGF+ v++se+a +++k +l +++
Migut.H00362.1.p 342 LASRLRSAYNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVVSHEGNRRVERLEPKSKWVRRMRSAGFGGVAYSEEAIAEVKNMLDEHA 433
************************************.****************************************************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MMQFTETFPP PPPPLHQSSV ISTTPPSFNP MNKNQVLRVG SWPGYFPTSK SLQGRLGDAN 60 CMEQLLVHCA TAIETNDATL AQQILWVLNN IAPPDGDSNQ RLTCGFLRAL ISRAAMSGNC 120 KLLSAVANVH AASDPTTTST HRFSIIELAS FVDLTPWHRF GFTAANAAVL EAVEGYPVVH 180 IVDLSLTHCM QIPTLIDAIA ARLDGPPLVK LTVAGAMEDF PPMLDLSYEE LGTKLVNFAR 240 SRNVAMEFRV VPSTSSNGFS SLIDQLRMQQ LRRAENGREA LVINCHMMLH YIPEEEEEHQ 300 TLTYETAAAA SLRTMFLKAV RGLDPTVVVL VDEDADFTSG NLASRLRSAY NYLWIPYDTV 360 DTFLPRGSKQ RQWYEADICW KIENVVSHEG NRRVERLEPK SKWVRRMRSA GFGGVAYSEE 420 AIAEVKNMLD EHAAGTT*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP006085 | 9e-32 | AP006085.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT28L24, TM0128, complete sequence. |