PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.H00323.2.p | ||||||||
Common Name | MIMGU_mgv1a003742mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | AP2 | ||||||||
Protein Properties | Length: 591aa MW: 64037.7 Da PI: 6.912 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.1 | 3.3e-16 | 307 | 366 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Migut.H00323.2.p 307 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 366 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 46.2 | 1.1e-14 | 409 | 460 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Migut.H00323.2.p 409 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 460 57****************988532...5************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 6.51E-21 | 307 | 374 | No hit | No description |
SuperFamily | SSF54171 | 9.15E-17 | 307 | 376 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.6E-13 | 307 | 366 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.203 | 308 | 374 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.8E-16 | 308 | 375 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-29 | 308 | 380 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-6 | 309 | 320 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.49E-24 | 409 | 470 | No hit | No description |
Pfam | PF00847 | 4.6E-10 | 409 | 460 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-18 | 409 | 469 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 19.124 | 410 | 468 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.0E-18 | 410 | 468 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.9E-34 | 410 | 474 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-6 | 450 | 470 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0007276 | Biological Process | gamete generation | ||||
GO:0010492 | Biological Process | maintenance of shoot apical meristem identity | ||||
GO:0042127 | Biological Process | regulation of cell proliferation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 591 aa Download sequence Send to blast |
MKSMSEENSN NWLGFSLCAG SSMAEGSSSE AVNENHTANY FSSSSSSYYP GIYYNGGGVD 60 NGGNGFYSHL TVMPLKSDGS LCLMEAINRS HPPAPKLEDF FGGATMGAHH HHYEGCDGGG 120 EMALSLDSMY YHQTHTHNGG AGGHDFLNSG GGGGHQHVLQ LQEYANYSPF RGQEDINYQA 180 AAAATTNKEH GLQVPTTMAE EEISAMKKWV SRNYSNNLED NAGEPGLPPP AAATLGSMGY 240 SDLQSLSLSM SPGSQSSSCV TAGSQLVPAA MGADCASFDT KKRGPDKVDQ KQVVHRKSLD 300 TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC KKEGQSRKGR QVYLGGYDME EKAARAYDLA 360 ALKYWGPSTH INFPLENYQQ ELEDMKNMSR QEYVAHLRRK SSGFSRGASI YRGVTRHHQH 420 GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDVAAIKFRG VNAVTNFDIT RYDVDRILES 480 NGLLSGEMAR RVSKALTSSS CSTENALMNN VGPAVGDFKD GGYLSAVPES TMRNGTGLSS 540 SSRESPTKNM VVVPMQFALP APLSNAGQWG PLTGPIRSQV PLFSAWTDAS * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CAC[AG]N[AT]TNCCNANG-3'. Required for the initiation and growth of ovules integumenta, and for the development of female gametophyte. Plays a critical role in the development of gynoecium marginal tissues (e.g. stigma, style and septa), and in the fusion of carpels and of medial ridges leading to ovule primordia. Also involved in organs initiation and development, including floral organs. Maintains the meristematic competence of cells and consequently sustains expression of cell cycle regulators during organogenesis, thus controlling the final size of each organ by controlling their cell number. Regulates INO autoinduction and expression pattern. As ANT promotes petal cell identity and mediates down-regulation of AG in flower whorl 2, it functions as a class A homeotic gene. {ECO:0000269|PubMed:10528263, ECO:0000269|PubMed:10639184, ECO:0000269|PubMed:10948255, ECO:0000269|PubMed:11041883, ECO:0000269|PubMed:12183381, ECO:0000269|PubMed:12271029, ECO:0000269|PubMed:12655002, ECO:0000269|PubMed:8742706, ECO:0000269|PubMed:8742707, ECO:0000269|PubMed:9001406, ECO:0000269|PubMed:9093862, ECO:0000269|PubMed:9118807}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00088 | SELEX | Transfer from AT4G37750 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.H00323.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854151.1 | 0.0 | PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X2 | ||||
Swissprot | Q38914 | 1e-165 | ANT_ARATH; AP2-like ethylene-responsive transcription factor ANT | ||||
TrEMBL | A0A022RVH9 | 0.0 | A0A022RVH9_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-139 | AP2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.H00323.2.p |