PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00283.1.p
Common NameMIMGU_mgv1a023671mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 269aa    MW: 30303.9 Da    PI: 5.2441
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00283.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-151360148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT++Ed ll ++++ +G g W++++ + g +R++k+c++rw++yl
  Migut.H00283.1.p 13 KGAWTKDEDILLRKCIENYGEGKWHLVPLRAGVNRCRKSCRLRWLNYL 60
                      79********************************************97 PP
2Myb_DNA-binding44.14.7e-1466110147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg + ++E +l+v+++++lG++ W++Ia +++ gRt++++k++w ++
  Migut.H00283.1.p  66 RGIFNQDEIDLIVRLHNLLGNR-WSLIAGRIP-GRTANDIKNFWKTH 110
                       677999****************.*********.***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129422.23164IPR017930Myb domain
SuperFamilySSF466893.56E-2610107IPR009057Homeodomain-like
SMARTSM007171.3E-131262IPR001005SANT/Myb domain
PfamPF002493.8E-151360IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-191467IPR009057Homeodomain-like
CDDcd001674.84E-101560No hitNo description
SMARTSM007171.4E-1365113IPR001005SANT/Myb domain
PROSITE profilePS5129416.41665115IPR017930Myb domain
PfamPF002492.0E-1267110IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-2068114IPR009057Homeodomain-like
CDDcd001671.48E-969111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MEKNQEVVLG VRKGAWTKDE DILLRKCIEN YGEGKWHLVP LRAGVNRCRK SCRLRWLNYL  60
RPNLKRGIFN QDEIDLIVRL HNLLGNRWSL IAGRIPGRTA NDIKNFWKTH FRKKSSGAGE  120
SSGAVKTPAL QGCNIFRPTP RTLSKSFQHV PEHCPSDDGP SDSSMFKNKE PFLSPVVEEG  180
GEDDGDDEEG DDEKIDECIK WWAELLETTE NGQGNNSSLF SDDHLMINEP SSAAKLTPNG  240
LFDHANIFAT HIDNGLTDLS LDFDDWEL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A2e-19131144104MYB PROTO-ONCOGENE PROTEIN
1mse_C3e-19131144104C-Myb DNA-Binding Domain
1msf_C3e-19131144104C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269|PubMed:15361138}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00283.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF6949921e-129JF694992.1 Mimulus cupreus cell-line inbred line Mcu042 MYB1-like protein 1 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855735.10.0PREDICTED: transcription factor MYB90-like
SwissprotQ9FNV95e-57MY113_ARATH; Transcription factor MYB113
TrEMBLA0A022RX700.0A0A022RX70_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.16e-59myb domain protein 113
Publications ? help Back to Top
  1. Li T, et al.
    Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis.
    Biochem. Biophys. Res. Commun., 2014. 454(1): p. 78-83
    [PMID:25450360]
  2. Mondal SK,Roy S
    Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
    J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
    [PMID:28490275]