PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00272.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 300aa    MW: 32608.9 Da    PI: 6.2386
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00272.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.7e-10214255955
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  Migut.H00272.1.p 214 AKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 255
                       69*******************5.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-14202265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.65E-12203259No hitNo description
PROSITE profilePS5088815.123205254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.7E-12208263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-11211260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-7215255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MAIIQASAFY DNNNFGGGPI INSSPEDNNN NHMYGGTRAY LEPESPEKPG HNFAKNFTMS  60
NSSSVSSPSS TNSNGLGYNQ AAAPNNNNNY NLSEEGNSVI SFKPDYGSFS GSLLSFDHTK  120
RARRNLYPRL IGEEDEYPLW EEDLHHHPSS YQSQLIDPKC AGAAGHGLPE TSGSHHDAAA  180
GNFQQMGENV QAMKKQCVGS SSDSKKPDPQ SVAAKNRRER ISERLKILQE LVPNGSKVDL  240
VTMLEKAISY VKFLQLQVKV LAADEFWPAQ GGKAPDLSQV REAIDAILAS QRDTNSSCK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00272.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2575494e-79KP257549.1 Salvia miltiorrhiza clone 117 basic helix-loop-helix transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855794.10.0PREDICTED: putative transcription factor bHLH086
TrEMBLA0A022RVN01e-134A0A022RVN0_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.H00272.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99862126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.18e-51RHD SIX-LIKE 1