PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00186.1.p
Common NameLOC105975334, MIMGU_mgv1a026210mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 484aa    MW: 53161.3 Da    PI: 4.9727
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00186.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS259.31.4e-791304822374
              GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       v+ L++ Ae +++++l+l + lL+rl+++ +sp+g+p+qR+a+yf+eAL+  l++     +   +  +t++++ +++++a+k+fs +sPi+ f
  Migut.H00186.1.p 130 VNELIQLAESIDTNSLQLGNVLLSRLNQTlSSPAGKPLQRIAFYFKEALQCLLTE-----STRPSRHPTTSSEIIQTIKAQKIFSTISPIPMF 217
                       689*************************99*************************.....33334445555569******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgv.pfefnvlvakr 185
                       + +taNqa+l+ +++++ vH+iDfdi+ G++W+++++ LasR+ +pp lRi +v+ ++     e + ++e L +f +el++ +f ++++ +++
  Migut.H00186.1.p 218 ASFTANQAVLDVMDNSTSVHVIDFDIGLGGHWASFMKDLASRATPPPALRISAVVCEQ--YGVESRLIRESLVQFSRELNIdRFVIDFISVRT 308
                       ********************************************************77..8899999**************55******9*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleakl 275
                       +e l+++++++  gE++aV l+ ++++ +          +e+L+ + ++sP vvv+v     +d  +s+s  + +++ +e ysal++slea  
  Migut.H00186.1.p 309 FEYLSFRSIKFTDGEKVAVLLSPEIFHRV---------GTEFLNDLPQVSPYVVVHVGIQggLDSgSSSSCRQAVIDGIELYSALLESLEAAE 392
                       *************************9998.........368***************9887345555677999*****************7774 PP

              GRAS 276 pres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpL 367
                       +    ++ +++E++++ + iv++   +g             re+l +aG++++ ls+ a+ qa++l+r+  ++g++v +++++++l+W+drp+
  Migut.H00186.1.p 393 SDGGgDWVQMIEAFVVFPMIVEAAGRRGIG-----S-----REALAAAGLREAGLSQLAELQAECLVRRGRVEGFHVVKQQAEMLLCWHDRPI 475
                       4444699************99888888877.....2.....6799************************************************ PP

              GRAS 368 vsvSaWr 374
                       v++SaW+
  Migut.H00186.1.p 476 VATSAWK 482
                       ******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098530.433103462IPR005202Transcription factor GRAS
PfamPF035144.7E-77130482IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MKVPFSVNTQ NNPKPPPATA AAAYEPKSVL ELCGSPISNQ KPLILVDPQL VDWDSFSELG  60
LHDHHDPNSV SKPTIHQLNS HPLTQIIPTD QYSNQLLQTD FGSLSDIPLI HDNSYSINSF  120
DSFTSFDGYV NELIQLAESI DTNSLQLGNV LLSRLNQTLS SPAGKPLQRI AFYFKEALQC  180
LLTESTRPSR HPTTSSEIIQ TIKAQKIFST ISPIPMFASF TANQAVLDVM DNSTSVHVID  240
FDIGLGGHWA SFMKDLASRA TPPPALRISA VVCEQYGVES RLIRESLVQF SRELNIDRFV  300
IDFISVRTFE YLSFRSIKFT DGEKVAVLLS PEIFHRVGTE FLNDLPQVSP YVVVHVGIQG  360
GLDSGSSSSC RQAVIDGIEL YSALLESLEA AESDGGGDWV QMIEAFVVFP MIVEAAGRRG  420
IGSREALAAA GLREAGLSQL AELQAECLVR RGRVEGFHVV KQQAEMLLCW HDRPIVATSA  480
WKY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A5e-2413548125378Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00186.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855976.10.0PREDICTED: scarecrow-like protein 15
TrEMBLA0A022S0C40.0A0A022S0C4_ERYGU; Uncharacterized protein
STRINGMigut.H00186.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA83052230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-100GRAS family protein