PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.G01330.1.p

Common Name

MIMGU_mgv1a020432mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

FAR1

Protein Properties

Length: 293aa MW: 33560 Da PI: 9.3959

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.G01330.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.4	1.1e-23	12	102	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY +YA++vGF +rk++++ s+ ++ + +++ s+e +++++++ t++++++++et++gCka++ v++++ ++kw+vt++++ HnHel Migut.G01330.1.p 12 FYTRYARRVGFGIRKNHKRLSQSDKLLIGVDYTFSREEQPKQSNEGkTKSSKTNQSETKIGCKAMMSVSLRReEEKWVVTRFVTYHNHELY 102 9******************************999999888777635777789999**********99**************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.4E-21	12	102	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	3.6E-21	224	292	IPR018289	MULE transposase domain

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence Send to blast
MVFDNPEDAQ TFYTRYARRV GFGIRKNHKR LSQSDKLLIG VDYTFSREEQ PKQSNEGKTK 60 SSKTNQSETK IGCKAMMSVS LRREEEKWVV TRFVTYHNHE LYTPRTTSLL RGHRKITPAQ 120 KNLINVLNES GIPATKIMSV LSHGSGGESN VGCALIDVQN HIGNKRRELL KEGDAQRMHN 180 YFMECQSKNP GFVYSIQLDD NNRMGNFFWA NTRSRLAYQY FGDVVTFDAT YLTNHYSMPF 240 VPFTGVNHHH QSVMFGCALL VNETTSSYVW LLRTWLEAMF GRASSVIIID ED*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.G01330.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012833069.1	0.0	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A022RKY7	0.0	A0A022RKY7_ERYGU; Uncharacterized protein
STRING	Migut.G01330.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA435	22	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-71	FAR1-related sequence 5

Link Out ? help Back to Top
Phytozome	Migut.G01330.1.p