PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00615.1.p
Common NameLOC105950400, MIMGU_mgv1a011652mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 276aa    MW: 29760.3 Da    PI: 7.9797
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00615.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.9e-17197231135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C++  Tp+WR gp g+ktLCnaCG++y++ +l
  Migut.G00615.1.p 197 CLHCQADRTPQWRAGPMGPKTLCNACGVRYKSGRL 231
                       99*****************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011412.044191227IPR000679Zinc finger, GATA-type
SMARTSM004013.9E-16191245IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.09E-15192254No hitNo description
Gene3DG3DSA:3.30.50.104.0E-14194229IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.84E-12196244No hitNo description
PfamPF003204.8E-15197231IPR000679Zinc finger, GATA-type
PROSITE patternPS003440197222IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007623Biological Processcircadian rhythm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MEFLDTKDPC FVIDDTLLDF TLEDEEVHKT FSEGGGAAAA AGVSVSSSSS SLESSNPAAA  60
SAAVFSHEAR NGLFPEFVEE ELEWLSNKEA FPAVETCFGI LSDNPELISS HKSPVSVLEN  120
STTNNYTTAL SCFEHLKVPV NFPVRARSKR RRRTRRSCSG DPPLQHHRPL SVENKSKVKS  180
SCGGNSGGGG DNMGRRCLHC QADRTPQWRA GPMGPKTLCN ACGVRYKSGR LLPEYRPANS  240
PTFSSNLHSN SHRKVVEMRK QKHVEVGGGI VGGPG*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00377DAPTransfer from AT3G24050Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00615.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829205.10.0PREDICTED: GATA transcription factor 1-like
SwissprotQ8LAU91e-43GATA1_ARATH; GATA transcription factor 1
TrEMBLA0A022RUZ30.0A0A022RUZ3_ERYGU; Uncharacterized protein
STRINGMigut.G00615.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40762445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-42GATA transcription factor 1