PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.G00276.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 256aa MW: 28771.5 Da PI: 4.3924 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.1 | 1e-08 | 7 | 34 | 28 | 55 |
AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55 + r++lg+f+ta+eAa a+++a+++++g Migut.G00276.1.p 7 KERHWLGTFDTAQEAALAYDRAALSIKG 34 389*********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 12.576 | 1 | 42 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.61E-17 | 1 | 41 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 5.7E-16 | 1 | 41 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.4E-10 | 1 | 48 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.32E-11 | 3 | 42 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.3E-4 | 8 | 34 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF101447 | 3.4E-5 | 69 | 74 | No hit | No description |
SuperFamily | SSF101447 | 3.4E-5 | 147 | 170 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
IRDLTTKERH WLGTFDTAQE AALAYDRAAL SIKGTQARTN FIYTTDHNTT FHSLIWNPFD 60 QFHNPLHQPP PPPPQQQTKP PPPPPIPQPV VQPENDTCHS HDSTNSGYLL DCIVPNNCLN 120 PSSSKRVSSS ENNANNNNNP MTMYEDYNLQ ELGGGAHCGL MWDHQQQCYT WGEEETTMSS 180 NSSCELTAMI NEQYSFMVQN NNNINNNQMC DQNNNNNNNN DNIISFDEMM MMMMDPAATS 240 FGDSSLDHVI GHSLF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.G00276.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012855456.1 | 1e-137 | PREDICTED: ethylene-responsive transcription factor ERF086-like, partial |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9307 | 21 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 3e-23 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.G00276.1.p |