PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.G00125.1.p | ||||||||
Common Name | MIMGU_mgv1a023814mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 262aa MW: 29388.2 Da PI: 5.1361 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.4 | 2.4e-20 | 76 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+G+r+++ +g+W+AeIrdp++ r++lg+f +ae+Aa+a+++a+k+++g Migut.G00125.1.p 76 STYRGIRQRP-WGKWAAEIRDPKK---GVRVWLGTFNSAEQAARAYDEAAKRIRG 126 56********.**********954...4************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.18E-32 | 76 | 135 | No hit | No description |
SuperFamily | SSF54171 | 3.4E-22 | 76 | 135 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 23.947 | 77 | 134 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.5E-32 | 77 | 135 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.9E-37 | 77 | 140 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.0E-14 | 77 | 126 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.2E-11 | 78 | 89 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.2E-11 | 100 | 116 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008219 | Biological Process | cell death | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009735 | Biological Process | response to cytokinin | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0010286 | Biological Process | heat acclimation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0051707 | Biological Process | response to other organism | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MCGGSIISDE PIIKRRGKLT TEELWAELDT ISHFWGFDFS DDAAKNQPEP ASQKPGPHNK 60 GNKEKEEKGK ERGRKSTYRG IRQRPWGKWA AEIRDPKKGV RVWLGTFNSA EQAARAYDEA 120 AKRIRGDKAK LNFPAIHQPP TPPQQPPPKK IRVVPEPQSK PSQVVMDCER QGAEPCYLKG 180 CEPIKDELSS WESLLGFELA AEPSQVIMEP IKDELSSWES FLGLEPAVEP SPFGVLDETL 240 DSVDLWMMDE FAAAQQNNLF F* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 6e-22 | 78 | 134 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00109 | PBM | Transfer from AT3G16770 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.G00125.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012828521.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor RAP2-3-like | ||||
TrEMBL | A0A022RVI6 | 1e-166 | A0A022RVI6_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 6e-45 | ethylene-responsive element binding protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.G00125.1.p |