PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00106.1.p
Common NameLOC105948967, MIMGU_mgv1a015325mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 162aa    MW: 17544.9 Da    PI: 10.2701
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00106.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.6e-193468135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  Migut.G00106.1.p 34 CVDCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 68
                      ********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011412.2022864IPR000679Zinc finger, GATA-type
SMARTSM004011.6E-142881IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.09E-122968No hitNo description
Gene3DG3DSA:3.30.50.101.1E-153368IPR013088Zinc finger, NHR/GATA-type
CDDcd002024.12E-123368No hitNo description
PROSITE patternPS0034403459IPR000679Zinc finger, GATA-type
PfamPF003209.8E-173468IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MMDLSDKGSE CEDMSSPTPT PDRVSSDGSN VKTCVDCGTS KTPLWRGGPA GPKSLCNACG  60
IRSRKKRRAL MGVTKEEKKT KKTSIVKNNN QSNSSNSCTS SSGDSTTKIG ESIIKKKLWV  120
FGRDVALQRP RSNTTRRRKW GEEEQQAAYL LMALSCGSVY A*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00335DAPTransfer from AT3G06740Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00106.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827686.11e-114PREDICTED: GATA transcription factor 16
TrEMBLA0A022RW901e-113A0A022RW90_ERYGU; Uncharacterized protein
STRINGMigut.G00106.1.p1e-114(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19992362
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.19e-33GATA transcription factor 15