PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00103.1.p
Common NameMIMGU_mgv1a019611mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 325aa    MW: 37072 Da    PI: 5.1902
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00103.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding476e-151562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+W  eEde+l+++++  G g+W++ +   g++R++k+c++rw +yl
  Migut.G00103.1.p 15 RGKWEVEEDEKLINYINANGEGSWRSLPTNAGLKRCGKSCRLRWINYL 62
                      89********************************************97 PP
2Myb_DNA-binding53.55.5e-1768113148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T+ Ede +v+ ++ +G++ W++Ia+ ++ gRt++++k++w+++l
  Migut.G00103.1.p  68 RGSFTPHEDETIVKFHNTFGNK-WSLIASNLP-GRTDNEIKNYWNSHL 113
                       89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.6671062IPR017930Myb domain
SuperFamilySSF466893.2E-2713109IPR009057Homeodomain-like
SMARTSM007178.8E-111464IPR001005SANT/Myb domain
PfamPF002491.7E-131562IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.0E-201669IPR009057Homeodomain-like
CDDcd001675.44E-71762No hitNo description
PROSITE profilePS5129422.63963117IPR017930Myb domain
SMARTSM007172.7E-1667115IPR001005SANT/Myb domain
PfamPF002496.0E-1568113IPR001005SANT/Myb domain
CDDcd001671.69E-1070113No hitNo description
Gene3DG3DSA:1.10.10.602.8E-2570116IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGRKACCDKS ETLKRGKWEV EEDEKLINYI NANGEGSWRS LPTNAGLKRC GKSCRLRWIN  60
YLKSGLKRGS FTPHEDETIV KFHNTFGNKW SLIASNLPGR TDNEIKNYWN SHLSRRTYLF  120
RSTAVVDSKF IKTHPTKRKK IVTNNNNNNN NEVPAKKKKI TSPPPVSDER ESNTLHEDSS  180
LSTCSSINTA DEFMLDEEMM VWDEHTLMQF HNFLQDHDNG GGGGGGGDVA SSCLTPTNDE  240
REKVIVNNNN ISDEKLVKFE SEEEAETTKT TTMQMQYSCP SPIVIYFDDD EQFRWDFDGG  300
FGGDEVNYPW SETKEEETMF NIWS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-21131175108B-MYB
1h8a_C2e-211311725128MYB TRANSFORMING PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137158RKKIVTNNNNNNNNEVPAKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00103.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828161.10.0PREDICTED: myb-related protein 308-like
TrEMBLA0A022RVL40.0A0A022RVL4_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.11e-58myb domain protein 12