PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00091.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 304aa    MW: 34606 Da    PI: 9.3282
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00091.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF39.95.3e-131047239
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevavii 39
                       i+n+  r+  f kR++gi K A+ELS+LC++++ +ii
  Migut.G00091.1.p 10 LIKNEKVRNAAFEKRKKGIVKSANELSTLCGVQIGMII 47
                      599********************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004322.5E-12162IPR002100Transcription factor, MADS-box
PROSITE profilePS5006617.549147IPR002100Transcription factor, MADS-box
CDDcd002661.92E-16263No hitNo description
SuperFamilySSF554558.11E-17281IPR002100Transcription factor, MADS-box
PRINTSPR004049.2E-7323IPR002100Transcription factor, MADS-box
PfamPF003197.4E-141151IPR002100Transcription factor, MADS-box
PRINTSPR004049.2E-72338IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MGRGKLRMEL IKNEKVRNAA FEKRKKGIVK SANELSTLCG VQIGMIINEP GQNNNEPTIW  60
PANREVITKL IDSYKSKSAG NDCRYGTYNL PAFFKNQTEK IEDEVNKLRK RTREVKYPKW  120
DERLDTCSED ELKDFAGKLT AKIESARVRI NSIKVSRSTV FVNPSAEQFQ QQQYYDGRFN  180
MGNQRMMIMN NGNYAYNNMQ DNRMQDWNVG NYGFGFDESR VPNGGFDPNF GNYGMMRVNG  240
GAGNGESRMS FTVPNVGPIM PYTNAPTFEQ LMPFYTPNEG QMASVFPQMQ AAQEGDYLQR  300
HGF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00091.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827797.10.0PREDICTED: floral homeotic protein PMADS 2-like
TrEMBLA0A022Q4W91e-154A0A022Q4W9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24572253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.11e-20M-type_MADS family protein