PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F02098.1.p
Common NameMIMGU_mgv1a022420mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family AP2
Protein Properties Length: 686aa    MW: 75678.4 Da    PI: 6.5961
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F02098.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.31e-09281337155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  +     ++ k  + g ++ +++Aa+ ++ a++k++g
  Migut.F02098.1.p 281 SIYRGVTRHRWTGRYEAHLWDnTCR-RegQTrKGRQ-GGYDKEDKAARSYDLAALKYWG 337
                       57*******************4444.2455535555.7799999*************98 PP
2AP246.77.8e-15380431155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Migut.F02098.1.p 380 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 431
                       57****************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.6E-13281347IPR016177DNA-binding domain
PfamPF008472.5E-7281337IPR001471AP2/ERF domain
CDDcd000182.95E-17281347No hitNo description
Gene3DG3DSA:3.30.730.105.0E-10282345IPR001471AP2/ERF domain
SMARTSM003801.9E-20282351IPR001471AP2/ERF domain
PROSITE profilePS5103216.674282345IPR001471AP2/ERF domain
PRINTSPR003677.1E-6283294IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-17380440IPR016177DNA-binding domain
CDDcd000184.17E-25380441No hitNo description
PfamPF008479.7E-10380431IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.2E-18381439IPR001471AP2/ERF domain
SMARTSM003802.7E-33381445IPR001471AP2/ERF domain
PROSITE profilePS5103219.177381439IPR001471AP2/ERF domain
PRINTSPR003677.1E-6421441IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    Send to blast
MNNNWLLGFP LSAQQVLQQH QQSQNDNSVP GHHDNNHLGV NFNGSDQISV VTPAGGAQIY  60
ATTVDESSST SSCFDHHLIP CLKNQLPPPN PHFPFCQPFN NTNSHHSQDW NMNSVSCSSS  120
SSHNYLDNSS NNNNNQNSSP KLENFLGFGG HSFADQLQQH NNLICNNTCT NMYEQTQAAP  180
AATTNNNNSS TIGLSMIKNW LRNNPEAGGS GAQTLSLSMS TGCSQSQTSS PLPLVVVGNN  240
IAAAATEITS CTSESSKDGQ SGALLESVPR KSVETFGQRT SIYRGVTRHR WTGRYEAHLW  300
DNTCRREGQT RKGRQGGYDK EDKAARSYDL AALKYWGTTT TTNFPINNYE KEIEDMKHMT  360
RQEYVASLRR KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE  420
AYDIAAIKFR GLNAVTNFEI NRYDVKSIME STNLPIGGAA KRLKDAENAE NMALELHRAS  480
YNDGNGNGNG NTNAWPTIAF QQAIYPYNSH QRLWCKQEQD NNLNNNNQEM ISHGNFSEIN  540
HQLQLGNNNT QNFLQPSLLM HNVMEQSSVS NAGVYGNSDS GDDRGNGFAM PMMGTVIVQD  600
DGNDYVGNIH EGMFGSMTTT ADASYQQHAR NYLYYHQQSQ ESSSNNNCDS WNHSIPIAVP  660
TLAARNINNV DSCNGASTFT VWNDT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F02098.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834466.10.0PREDICTED: AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A022RHN40.0A0A022RHN4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA70992131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.11e-126AP2 family protein