PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01981.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 303aa    MW: 33048.9 Da    PI: 6.0957
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01981.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.48.6e-18220253134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Migut.F01981.1.p 220 CLHCEITKTPQWRAGPLGPKTLCNACGVRYKSGR 253
                       99*****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169925.3E-743293IPR016679Transcription factor, GATA, plant
PROSITE profilePS5011411.266214250IPR000679Zinc finger, GATA-type
SMARTSM004011.2E-14214264IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.102.9E-14218251IPR013088Zinc finger, NHR/GATA-type
SuperFamilySSF577169.03E-15218277No hitNo description
CDDcd002023.43E-14219276No hitNo description
PfamPF003202.0E-15220253IPR000679Zinc finger, GATA-type
PROSITE patternPS003440220245IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MGPNFMDEID CGNFFDQIDD LIEFPPDNEC GEDSNLVISS DVRKDFPAWN NDLPDCDPLF  60
SGSHVSSASD LSAELSVPYE DIVQLEWLSN FMEDSFSCKD MTIGKQNSSV PHNQFQTSSP  120
VSVLESSSSS NSTSSSLSPT HRGPQRARSK RARPASFNPR AAIQLISPSP EPNHNFIIES  180
PPVMKKAHKP KPKKIKETPP VDPLSANDEY TPPGQALRKC LHCEITKTPQ WRAGPLGPKT  240
LCNACGVRYK SGRLFPEYRP AASPTFVPSV HSNSHKKVLE MRNTVEPENG ASGPGPITSA  300
SL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01981.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834748.10.0PREDICTED: GATA transcription factor 8-like
RefseqXP_012834749.10.0PREDICTED: GATA transcription factor 8-like
RefseqXP_012834750.10.0PREDICTED: GATA transcription factor 8-like
RefseqXP_012834752.10.0PREDICTED: GATA transcription factor 8-like
TrEMBLA0A022RL361e-127A0A022RL36_ERYGU; Uncharacterized protein
STRINGMigut.F01981.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23452358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.17e-42GATA transcription factor 9