PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01122.1.p
Common NameMIMGU_mgv1a009736mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 280aa    MW: 30632.1 Da    PI: 7.0406
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01122.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding569.1e-183279148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd++lvd + ++G gtW+  ++  g+ R++k+c++rw++yl
  Migut.F01122.1.p 32 RGAWTNEEDKILVDFISLHGHGTWRNLPQLAGLLRCGKSCRLRWNNYL 79
                      89******************************99*************7 PP
2Myb_DNA-binding48.12.7e-1585130148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg+++++E+  + ++   lG++ W++Ia++++ gRt++++k++w+++l
  Migut.F01122.1.p  85 RGPFSPDEENTITRLQSTLGNK-WAAIASHLP-GRTDNDIKNFWNSHL 130
                       89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.8E-222482IPR009057Homeodomain-like
PROSITE profilePS5129415.9262779IPR017930Myb domain
SuperFamilySSF466895.14E-2830126IPR009057Homeodomain-like
SMARTSM007172.4E-123181IPR001005SANT/Myb domain
PfamPF002491.9E-153279IPR001005SANT/Myb domain
CDDcd001671.71E-103479No hitNo description
PROSITE profilePS5129423.80180134IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.3E-2583134IPR009057Homeodomain-like
SMARTSM007173.7E-1584132IPR001005SANT/Myb domain
PfamPF002492.3E-1485130IPR001005SANT/Myb domain
CDDcd001676.10E-1187130No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MGKMRENVEE GDNKKKKRKG RIACCEKDGV RRGAWTNEED KILVDFISLH GHGTWRNLPQ  60
LAGLLRCGKS CRLRWNNYLR PDIKRGPFSP DEENTITRLQ STLGNKWAAI ASHLPGRTDN  120
DIKNFWNSHL RKSLAHASSK SGGDTSLSQP CHSSTTTTPP LFLQTPPGGS TTTTTNHPGG  180
DYFIRLWNSE IGESFRDGAT VLSHSHSPAS QASNVGLLSC KKELGDDDDV AACYSSKSYE  240
ELDDSSEAML KLLLDFPVGG DDMEFLQGPV GDALNSSHS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C4e-233213427128MYB TRANSFORMING PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11318KKKKRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01122.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858160.10.0PREDICTED: myb-related protein Myb4-like
SwissprotQ9M2D93e-71MYB17_ARATH; Transcription factor MYB17
TrEMBLA0A022PT580.0A0A022PT58_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.18e-72myb domain protein 17