PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01056.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 367aa    MW: 40301.9 Da    PI: 4.6284
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01056.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-19113162255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +++GVr+++ +g+W+AeIrdp    k++r++lg+f taeeAa  ++ a+ k++g
  Migut.F01056.1.p 113 KFRGVRQRP-WGKWAAEIRDPA---KKTRIWLGTFNTAEEAAMVYDTAAIKIRG 162
                       89*******.**********83...36*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.3E-31112170IPR001471AP2/ERF domain
SMARTSM003808.5E-42113176IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-22113170IPR016177DNA-binding domain
CDDcd000186.85E-34113169No hitNo description
PROSITE profilePS5103223.499113170IPR001471AP2/ERF domain
PfamPF008472.4E-12113162IPR001471AP2/ERF domain
PRINTSPR003671.2E-10114125IPR001471AP2/ERF domain
PRINTSPR003671.2E-10136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MDRIVCSVKY TEHEEIIKKL IKPPPPKQKE IAESASRPRR VRISVTDPDA TDSSGDENDD  60
VDFPRRRVKR FVSEIRMEVS SATNRAAAEV VVLQPKPKLM KAVAAAANGG CRKFRGVRQR  120
PWGKWAAEIR DPAKKTRIWL GTFNTAEEAA MVYDTAAIKI RGPDAQTNFT VPSPENHVTS  180
VSGYDSGDES RNVVSSPTSV LRFRSSVASG ENSGESRSGS GHESGKEDHA IDSKHDIGKP  240
VYPVGPVQDP VRLVDEFQGE TNTVPNYSSD FLPMDIPFLD DFFNFEAQDH ALFLDLPPPP  300
SCSGSGNFVD STMAISSLDD LLLDNSFAEL DLGEFKDTCQ DFGSFEVDGF FQDMPDFASV  360
DPMFVP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-20112169159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A7e-20112169462ATERF1
3gcc_A7e-20112169462ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01056.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858195.10.0PREDICTED: ethylene-responsive transcription factor CRF4-like
TrEMBLA0A022PV020.0A0A022PV02_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-57cytokinin response factor 4