PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00722.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 413aa    MW: 45335 Da    PI: 5.3891
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00722.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72.1e-163378147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg+W+ +Ed +l  +v ++G ++W++Iar ++ gR++k+c++rw + 
  Migut.F00722.1.p 33 RGPWSDQEDAILSALVGKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 78
                      89******************************.***********985 PP
2Myb_DNA-binding53.74.7e-1785129147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r+++T eEd ++++a++ +G++ W++Ia+ ++ gRt++ +k++w++ 
  Migut.F00722.1.p  85 RKPFTDEEDRIILEAHAVYGNK-WASIAKILP-GRTDNAIKNHWNST 129
                       789*******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.4742879IPR017930Myb domain
SuperFamilySSF466892.93E-3030126IPR009057Homeodomain-like
SMARTSM007172.3E-143281IPR001005SANT/Myb domain
PfamPF002493.7E-153378IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.3E-243486IPR009057Homeodomain-like
CDDcd001673.10E-133577No hitNo description
PROSITE profilePS5129425.52280134IPR017930Myb domain
SMARTSM007173.9E-1684132IPR001005SANT/Myb domain
PfamPF002493.1E-1585129IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.0E-2287133IPR009057Homeodomain-like
CDDcd001673.29E-1387130No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MMTEEEMREV EGQVVVEAMA VEGGVEEAKG KIRGPWSDQE DAILSALVGK FGARNWSLIA  60
RGIPGRSGKS CRLRWCNQLD PCVMRKPFTD EEDRIILEAH AVYGNKWASI AKILPGRTDN  120
AIKNHWNSTL RRKCGFPRRS STPLTVQMLP NISIDWTKAS SEDTLSGGGP RNSFKPSEEV  180
ETRSVSINHP KNPEYETLQI GGPSTSALEI DEVGLIEDLE KKYEEDKTQT CVPKQNPSVS  240
RPIAKVGGFD IYNSCSDEST FSGAVLPITG SMIRPSKMDL GICKKFLDVG ASCDGDRIIP  300
LQCGYGCCSN STTHSSRSSL LGPEFVDYEE TPSFSSHELT SAAADLNNMA WIRSGLENSR  360
NAKRQKGSED SVKNDQMIFD RQNVFTGVTR EVGTTKMSMP TFTLQTQVEG LS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-39321336107B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00722.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858381.10.0PREDICTED: transcriptional activator Myb-like
TrEMBLA0A022PUC51e-165A0A022PUC5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26112454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.19e-85myb domain protein 109