PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.F00657.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | G2-like | ||||||||
Protein Properties | Length: 126aa MW: 14177.6 Da PI: 5.6366 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 93 | 2.5e-29 | 77 | 126 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtpeLH +Fv+ave+LGG e+AtPk +l+lm+vkgL+++hvkSHLQ Migut.F00657.1.p 77 PRLRWTPELHLCFVHAVERLGGDERATPKLVLQLMNVKGLSIAHVKSHLQ 126 9************************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.5E-27 | 73 | 126 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 11.527 | 73 | 126 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 6.81E-14 | 74 | 126 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-20 | 77 | 126 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.2E-9 | 78 | 126 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MINMQKANTT NSSSESDDQE DMENSKTTPP NLQIEDGEKD EENESNSTVE ENNNNGKNNK 60 SSNNSASVRQ YIRSKTPRLR WTPELHLCFV HAVERLGGDE RATPKLVLQL MNVKGLSIAH 120 VKSHLQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-19 | 78 | 126 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-19 | 78 | 126 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-19 | 78 | 126 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-19 | 78 | 126 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-19 | 78 | 126 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.F00657.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858127.1 | 7e-73 | PREDICTED: probable transcription factor KAN4 | ||||
TrEMBL | A0A022PW70 | 1e-71 | A0A022PW70_ERYGU; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8573 | 21 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 2e-32 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.F00657.1.p |