PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00403.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 280aa    MW: 30861.4 Da    PI: 6.2532
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00403.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-192474256
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                      ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a+++l+g+
  Migut.F00403.1.p 24 KFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDKAARQLRGA 74
                      899******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.75E-202481IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-292481IPR001471AP2/ERF domain
SMARTSM003806.6E-352487IPR001471AP2/ERF domain
PROSITE profilePS5103220.6662481IPR001471AP2/ERF domain
CDDcd000187.58E-312481No hitNo description
PfamPF008476.0E-132473IPR001471AP2/ERF domain
PRINTSPR003677.8E-82536IPR001471AP2/ERF domain
PRINTSPR003677.8E-84763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MKQSTPAGDE GRVRRKTSSR GHHKFVGVRQ RPSGRWVAEI KDSLQKVRLW LGTFDTAEDA  60
ARAYDKAARQ LRGANARTNF ELPKPGPGST VFENSEPFPF DEMCRSEEPD GLIGVLKAKL  120
LNKKRGHASS SSSSSNPLFN FSNNRVQTYD QCIEKTDREM GHVGSSRPSL VWPGEPAQLI  180
WSPETINHGQ ENVTMVNLAW PQPAMDLGYE CNPLSEVVAL NNKAGEINVQ VDEAPSPWVP  240
LPTLDDGQYG YCENSNWISG ANISWDSELH CVVPSVLGQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1522801271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00403.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851986.10.0PREDICTED: ethylene-responsive transcription factor RAP2-12-like
TrEMBLA0A022QEV31e-162A0A022QEV3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118691819
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-19related to AP2 11