PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.F00381.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 24809.4 Da PI: 5.5975 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 55 | 104 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r+++ g+Wv+eIr p++ ++r++lg++ t+e+Aa+a++ a+++l+g Migut.F00381.1.p 55 PVYRGIRYRS--GKWVSEIRQPRK---TTRVWLGTYPTPEMAAAAYDVAALALKG 104 68*****976..*********843...5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 6.8E-12 | 55 | 104 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.007 | 56 | 112 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-26 | 56 | 113 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.9E-27 | 56 | 118 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-18 | 56 | 113 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 4.57E-16 | 57 | 114 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MDNNHQNYYY SSPNPLIIDY ENINSTTPIQ ENLSPPPSLR RQQPPVSSPT SGRHPVYRGI 60 RYRSGKWVSE IRQPRKTTRV WLGTYPTPEM AAAAYDVAAL ALKGPETALN FPDLAQSYPI 120 PDSHSAAGIR DAAAQAAAAV AAAPQTGGAG GHGRVVHAPP SENEAGSSSS GAPAPGHEFV 180 DEEALFYMPK LLEDMAEGML VSPPRMKSGA AADEESPEYY SRNDGLWSYR * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.F00381.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012851997.1 | 1e-168 | PREDICTED: ethylene-responsive transcription factor ERF027 | ||||
Swissprot | Q9FJ90 | 3e-50 | ERF25_ARATH; Ethylene-responsive transcription factor ERF025 | ||||
TrEMBL | A0A022QCS0 | 1e-140 | A0A022QCS0_ERYGU; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA553 | 22 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.F00381.1.p |
Publications ? help Back to Top | |||
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