PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00362.2.p
Common NameLOC105971866, MIMGU_mgv1a002129mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 711aa    MW: 78614.5 Da    PI: 6.2139
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00362.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.11.7e-194398156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      r+k +++t+ q++eLe+ F+ n++p++++r eL k+l L+ +qVk+WFqNrR+++k
  Migut.F00362.2.p 43 RKKYHRHTTFQIQELESSFKDNPHPDEKARLELGKRLALEGKQVKFWFQNRRTQMK 98
                      7999*************************************************999 PP
2START178.44.2e-562404581205
                       HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
             START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                       ela++a++el+k+a++++p+Wv+      es+n +e+ ++f++  +     + +ea ras +v  ++++l e+l+d++ qW+e+++    +a+
  Migut.F00362.2.p 240 ELALAATDELIKLAQVDSPLWVRNLdgnrESLNLEEYAKTFPPCIGvkpahFVTEATRASENVMINSTELIETLMDVN-QWTEMFPwnigRAS 331
                       57999**************************************9999***99**************************.************** PP

                       EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS
             START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166
                       +++vis+g      galqlm+ae+q lsplv+ R + fvR+++q+++++w++vdvSvd   + p     v +++lpSg+++++++ng skvtw
  Migut.F00362.2.p 332 IVDVISPGmsgsrnGALQLMQAEFQILSPLVApRQVKFVRFCKQHKEDTWAVVDVSVDTLFQLP-----VNCRRLPSGCIVQDMPNGCSKVTW 419
                       *******************************99***************************9999.....899********************* PP

                       EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
             START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                       veh++++++ +h+l++++++sg+a+ga++wva l++qce
  Migut.F00362.2.p 420 VEHTEYDESNIHQLYQPILRSGTAFGAQKWVADLRKQCE 458
                       **************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.8E-2018102IPR009057Homeodomain-like
SuperFamilySSF466899.84E-1929100IPR009057Homeodomain-like
PROSITE profilePS5007117.21640100IPR001356Homeobox domain
SMARTSM003891.0E-1542104IPR001356Homeobox domain
CDDcd000867.94E-1643100No hitNo description
PfamPF000465.2E-174398IPR001356Homeobox domain
PROSITE profilePS5084840.408231462IPR002913START domain
SuperFamilySSF559611.32E-31232458No hitNo description
CDDcd088759.60E-104235458No hitNo description
PfamPF018522.7E-48240458IPR002913START domain
SMARTSM002342.0E-36240459IPR002913START domain
Gene3DG3DSA:3.30.530.204.1E-4297457IPR023393START-like domain
Gene3DG3DSA:3.30.530.204.9E-5481563IPR023393START-like domain
SuperFamilySSF559611.51E-16483706No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    Send to blast
MENIREMGLI GETYELESRS GSDNIEAGSG DDHNTSETKS SKRKKYHRHT TFQIQELESS  60
FKDNPHPDEK ARLELGKRLA LEGKQVKFWF QNRRTQMKTQ LERHENSILK QENEKLRIEN  120
ITMKEAMRNP TCETCGSQAI LGEVPIEHHH LMIENARLKE ELSRLGILAS KFLTRSNNGS  180
TLELAVGRNE FSGFNSMDNP STMIPSLGLD FFGDRVSNSF PVMPPQMSVD APFDKSVFLE  240
LALAATDELI KLAQVDSPLW VRNLDGNRES LNLEEYAKTF PPCIGVKPAH FVTEATRASE  300
NVMINSTELI ETLMDVNQWT EMFPWNIGRA SIVDVISPGM SGSRNGALQL MQAEFQILSP  360
LVAPRQVKFV RFCKQHKEDT WAVVDVSVDT LFQLPVNCRR LPSGCIVQDM PNGCSKVTWV  420
EHTEYDESNI HQLYQPILRS GTAFGAQKWV ADLRKQCELF SVMMSSASDN SGLPPSSKKS  480
MVKLAQRMTR NFCSVICSTV HKWEVVQSSE NMRIMVRKSM GNSGEPSGII LSATTTVWMP  540
VSPHHLLEFL QNVNNRAHWD GLSRDGPMQP MLHIPKSQDF GNTISLLRST TMPAGNGMLI  600
LQETCSDESG SMIVHAGVEA AYMNAVVGGG DPSGVAILPS GFAIAPDCFP DSGEAHEGRL  660
GGGGGGQSLL TVVFQMLVSN TPAAQLTIES VETVKSLIAR TLQGIKNGLQ *
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00362.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852235.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A022QAU90.0A0A022QAU9_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]