PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00362.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 781aa    MW: 85529.2 Da    PI: 6.6285
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00362.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.9e-19113168156
                       TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       r+k +++t+ q++eLe+ F+ n++p++++r eL k+l L+ +qVk+WFqNrR+++k
  Migut.F00362.1.p 113 RKKYHRHTTFQIQELESSFKDNPHPDEKARLELGKRLALEGKQVKFWFQNRRTQMK 168
                       7999*************************************************999 PP
2START178.15.1e-563105281205
                       HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
             START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                       ela++a++el+k+a++++p+Wv+      es+n +e+ ++f++  +     + +ea ras +v  ++++l e+l+d++ qW+e+++    +a+
  Migut.F00362.1.p 310 ELALAATDELIKLAQVDSPLWVRNLdgnrESLNLEEYAKTFPPCIGvkpahFVTEATRASENVMINSTELIETLMDVN-QWTEMFPwnigRAS 401
                       57999**************************************9999***99**************************.************** PP

                       EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS
             START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166
                       +++vis+g      galqlm+ae+q lsplv+ R + fvR+++q+++++w++vdvSvd   + p     v +++lpSg+++++++ng skvtw
  Migut.F00362.1.p 402 IVDVISPGmsgsrnGALQLMQAEFQILSPLVApRQVKFVRFCKQHKEDTWAVVDVSVDTLFQLP-----VNCRRLPSGCIVQDMPNGCSKVTW 489
                       *******************************99***************************9999.....899********************* PP

                       EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
             START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                       veh++++++ +h+l++++++sg+a+ga++wva l++qce
  Migut.F00362.1.p 490 VEHTEYDESNIHQLYQPILRSGTAFGAQKWVADLRKQCE 528
                       **************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.6E-2088172IPR009057Homeodomain-like
SuperFamilySSF466891.11E-1899170IPR009057Homeodomain-like
PROSITE profilePS5007117.216110170IPR001356Homeobox domain
SMARTSM003891.0E-15112174IPR001356Homeobox domain
PfamPF000465.9E-17113168IPR001356Homeobox domain
CDDcd000867.12E-16113170No hitNo description
PROSITE profilePS5084840.408301532IPR002913START domain
SuperFamilySSF559611.65E-31302528No hitNo description
CDDcd088753.97E-103305528No hitNo description
SMARTSM002342.0E-36310529IPR002913START domain
PfamPF018523.2E-48310528IPR002913START domain
Gene3DG3DSA:3.30.530.204.9E-4367527IPR023393START-like domain
Gene3DG3DSA:3.30.530.205.6E-5551633IPR023393START-like domain
SuperFamilySSF559611.79E-16553776No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 781 aa     Download sequence    Send to blast
MSFGGFTSKT SSGFLRPSSS GGGKTAAEGL SSFNPISAAA AGGGGGDMSQ PLQMLHSSSH  60
SRPFSLARPK MENIREMGLI GETYELESRS GSDNIEAGSG DDHNTSETKS SKRKKYHRHT  120
TFQIQELESS FKDNPHPDEK ARLELGKRLA LEGKQVKFWF QNRRTQMKTQ LERHENSILK  180
QENEKLRIEN ITMKEAMRNP TCETCGSQAI LGEVPIEHHH LMIENARLKE ELSRLGILAS  240
KFLTRSNNGS TLELAVGRNE FSGFNSMDNP STMIPSLGLD FFGDRVSNSF PVMPPQMSVD  300
APFDKSVFLE LALAATDELI KLAQVDSPLW VRNLDGNRES LNLEEYAKTF PPCIGVKPAH  360
FVTEATRASE NVMINSTELI ETLMDVNQWT EMFPWNIGRA SIVDVISPGM SGSRNGALQL  420
MQAEFQILSP LVAPRQVKFV RFCKQHKEDT WAVVDVSVDT LFQLPVNCRR LPSGCIVQDM  480
PNGCSKVTWV EHTEYDESNI HQLYQPILRS GTAFGAQKWV ADLRKQCELF SVMMSSASDN  540
SGLPPSSKKS MVKLAQRMTR NFCSVICSTV HKWEVVQSSE NMRIMVRKSM GNSGEPSGII  600
LSATTTVWMP VSPHHLLEFL QNVNNRAHWD GLSRDGPMQP MLHIPKSQDF GNTISLLRST  660
TMPAGNGMLI LQETCSDESG SMIVHAGVEA AYMNAVVGGG DPSGVAILPS GFAIAPDCFP  720
DSGEAHEGRL GGGGGGQSLL TVVFQMLVSN TPAAQLTIES VETVKSLIAR TLQGIKNGLQ  780
*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00362.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852235.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A022QAU90.0A0A022QAU9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]